RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 SRXN1Q9BYN0 137 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 OR11A1Q9GZK7 315 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 EFCAB1Q9HAE3 211 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 PACSIN3Q9UKS6 424 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 CLEC4AQ9UMR7 237 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 ICE1Q9Y2F5 2266 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 TMED7-TICAM2A0A0A6YYA0 188 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 IGHV3-15A0A0B4J1V0 119 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 TMEM72A0PK05 275 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 SLC22A20A6NK97 555 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 HSPB2A8KAH6 182 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 M0R3H8 397 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 ETV2O00321 342 aaPredicted RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 ADAMDEC1O15204 470 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 TMIGD3P0DMS9 266 aaPredicted RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 TFPIP10646 304 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 BMP5P22003 454 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 CHRNB4P30926 498 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 PRKAR1BP31321 381 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 PCGF2P35227 344 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 SLC7A2P52569 658 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 CRYBA2P53672 197 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 PCBP3P57721 371 aaKnown RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 CARD18P57730 90 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 EEFSECP57772 596 aaKnown RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 RPS3AP61247 264 aaKnown RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 BNIP2Q12982 314 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 SELENBP1Q13228 472 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 SNTB1Q13884 538 aaKnown RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 SF3B4Q15427 424 aaKnown RBP eCLIP10.46□□□□□ -0.73
CUX1-207ENST00000465461 HSPB2Q16082 182 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 DUSP7Q16829 419 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 GKAP1Q5VSY0 366 aaPredicted RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 SP5Q6BEB4 398 aaPredicted RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 C8orf82Q6P1X6 216 aaPredicted RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 DHRS4L2Q6PKH6 230 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 ESPNLQ6ZVH7 1005 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 GRINAQ7Z429 371 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 ARMC8Q8IUR7 673 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 FITM2Q8N6M3 262 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 RELL2Q8NC24 303 aaPredicted RBP10.46□□□□□ -0.73
CUX1-207ENST00000465461 GPR32P1Q8NGA4 272 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 LILRB4Q8NHJ6 448 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 ASB5Q8WWX0 329 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 TAMM41Q96BW9 452 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 CMTM5Q96DZ9 223 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 ARL5BQ96KC2 179 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 LRRC37BQ96QE4 947 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 OR5B2Q96R09 309 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 ZNF607Q96SK3 696 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 PRRG4Q9BZD6 226 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 COQ10BQ9H8M1 238 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 OSGIN1Q9UJX0 560 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 TMED7Q9Y3B3 224 aa10.46□□□□□ -0.73
CUX1-207ENST00000465461 DOCK7Q96N67 2140 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 ZC3H12DA2A288 527 aaKnown RBP10.45□□□□□ -0.74
CUX1-207ENST00000465461 FAM220BPB1ANY3 271 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 NME4O00746 187 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 TPST2O60704 377 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 SERPINB7O75635 380 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 DCTN3O75935 186 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 RCBTB2O95199 551 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 AGAP20933 346 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 HTR2AP28223 471 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 ELK4P28324 431 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 PRDX6P30041 224 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 APOBEC1P41238 236 aaKnown RBP10.45□□□□□ -0.74
CUX1-207ENST00000465461 PSME3P61289 254 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 SIRPAP78324 504 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 LIPEQ05469 1076 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 ZNF787Q6DD87 383 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 ZNF550Q7Z398 422 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 RBM45Q8IUH3 476 aaKnown RBP10.45□□□□□ -0.74
CUX1-207ENST00000465461 ZNF440Q8IYI8 595 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 ANKS4BQ8N8V4 417 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 CCDC197Q8NCU1 140 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 OR4D11Q8NGI4 311 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 VANGL1Q8TAA9 524 aaPredicted RBP10.45□□□□□ -0.74
CUX1-207ENST00000465461 SLC26A7Q8TE54 656 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 REXO5Q96IC2 774 aaKnown RBP10.45□□□□□ -0.74
CUX1-207ENST00000465461 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 TM9SF2Q99805 663 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 SPATA5L1Q9BVQ7 753 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 ARMC7Q9H6L4 198 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 SERINC1Q9NRX5 453 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 STOML1Q9UBI4 398 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 CHRNA9Q9UGM1 479 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 TAGLN3Q9UI15 199 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 MED12LQ86YW9 2145 aa10.45□□□□□ -0.74
CUX1-207ENST00000465461 GJE1A6NN92 205 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 FAAHO00519 579 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 SYNGR4O95473 234 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 NCK1P16333 377 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 TNFRSF1BP20333 461 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 CD247P20963 164 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 PTNP21246 168 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 ENPP1P22413 925 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 CTSSP25774 331 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 SLC7A1P30825 629 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 SLC1A3P43003 542 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 283.6 ms