RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TIGD3Q6B0B8 471 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 FAAH2Q6GMR7 532 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ASB18Q6ZVZ8 466 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ZNF438Q7Z4V0 828 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 THAP7Q9BT49 309 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-204ENST00000465425 SLA2Q9H6Q3 261 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 TICRRQ7Z2Z1 1910 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ARHGEF17Q96PE2 2063 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-204ENST00000465425 EPOPA6NHQ4 379 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 INMT-MINDY4F8WBC2 141 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ARSBP15848 533 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ERP29P30040 261 aaKnown RBP16.9■□□□□ 0.3
SYNE4-204ENST00000465425 EMDP50402 254 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 PSG6Q00889 435 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 HYAL1Q12794 435 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ACSM3Q53FZ2 586 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 GRAMD2AQ8IUY3 354 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 CADM2Q8N3J6 435 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 MS4A15Q8N5U1 240 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 CREB3L1Q96BA8 519 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 ERMAPQ96PL5 475 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-204ENST00000465425 GDF15Q99988 308 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 RBCK1Q9BYM8 510 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 DNAJB12Q9NXW2 375 aaKnown RBP16.9■□□□□ 0.3
SYNE4-204ENST00000465425 RPS6KB2Q9UBS0 482 aa16.9■□□□□ 0.3
SYNE4-204ENST00000465425 FANCMQ8IYD8 2048 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-204ENST00000465425 CENPBD1B2RD01 187 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 TFF2Q03403 129 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 DGAT2L6Q6ZPD8 337 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 ZNF761Q86XN6 746 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-204ENST00000465425 DTX3Q8N9I9 347 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 FAM98AQ8NCA5 519 aaKnown RBP16.89■□□□□ 0.29
SYNE4-204ENST00000465425 OR52E2Q8NGJ4 325 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 TRMT10AQ8TBZ6 339 aaKnown RBP16.89■□□□□ 0.29
SYNE4-204ENST00000465425 GHSRQ92847 366 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 PGLYRP3Q96LB9 341 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 MCCC2Q9HCC0 563 aa16.89■□□□□ 0.29
SYNE4-204ENST00000465425 NGFRP08138 427 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 NPR2P20594 1047 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 THBS2P35442 1172 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 NRG3P56975 720 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 DEFB110Q30KQ9 67 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 BICRALQ6AI39 1079 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 SFTPA2Q8IWL1 248 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 SLC43A2Q8N370 569 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 OR13H1Q8NG92 308 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 OR9A4Q8NGU2 314 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 OR5J2Q8NH18 312 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 SLC37A2Q8TED4 501 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 RBM18Q96H35 190 aaKnown RBP16.88■□□□□ 0.29
SYNE4-204ENST00000465425 PEX11GQ96HA9 241 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 ZNF426Q9BUY5 554 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 GSDMCQ9BYG8 508 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 TTTY10Q9BZA0 68 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 FOLH1BQ9HBA9 442 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 A0A1W2PRG6 482 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 GNB5O14775 395 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 SCO2O43819 266 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 SERPINA3P01011 423 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 RAB3BP20337 219 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 ACAA2P42765 397 aaKnown RBP16.88■□□□□ 0.29
SYNE4-204ENST00000465425 RAB25P57735 213 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 RRAS2P62070 204 aaPredicted RBP16.88■□□□□ 0.29
SYNE4-204ENST00000465425 PPP1CAP62136 330 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 FAPQ12884 760 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 DMKNQ6E0U4 476 aaPredicted RBP16.88■□□□□ 0.29
SYNE4-204ENST00000465425 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 PXKQ7Z7A4 578 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 LSMEM1Q8N8F7 131 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 SDR9C7Q8NEX9 313 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 OR4N2Q8NGD1 307 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 GPBAR1Q8TDU6 330 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 ABCG5Q9H222 651 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 RPRD1BQ9NQG5 326 aaKnown RBP16.88■□□□□ 0.29
SYNE4-204ENST00000465425 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.88■□□□□ 0.29
SYNE4-204ENST00000465425 MCUBQ9NWR8 336 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 NOX1Q9Y5S8 564 aa16.88■□□□□ 0.29
SYNE4-204ENST00000465425 KIR2DS5A0A0G2JLQ3 304 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 A0A0G2JNG1 304 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 A0A1B0GVC2 190 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 A6NIN4 97 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 SLC9B1P1A6NJY1 282 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 KIR2DS3K7RE56 304 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 ADAM11O75078 769 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 SC5DO75845 299 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 PAHP00439 452 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 UBE2IP63279 158 aaKnown RBP16.87■□□□□ 0.29
SYNE4-204ENST00000465425 STX4Q12846 297 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 GAS6Q14393 721 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 GPR176Q14439 515 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 KIR2DS5Q14953 304 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 ULK3Q6PHR2 472 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 KRT74Q7RTS7 529 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 SSX6Q7RTT6 188 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 ZNF550Q7Z398 422 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 OR4K13Q8NH42 304 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 GRPEL2Q8TAA5 225 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 RIT1Q92963 219 aa16.87■□□□□ 0.29
SYNE4-204ENST00000465425 ZMYND19Q96E35 227 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms