RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 PCDHGB6Q9Y5F9 930 aa12.15□□□□□ -0.46
ATF3-208ENST00000465155 ELOA3DA6NLF2 546 aaPredicted RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 SHISA8B8ZZ34 492 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 G3V2T6 193 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 WISP1O95388 367 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 GDF1P27539 372 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 PEX2P28328 305 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 MERTKQ12866 999 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 FOXF1Q12946 379 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 ZNF169Q14929 603 aaPredicted RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 ELOA3BQ3SY89 546 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 PODNL1Q6PEZ8 512 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 SHQ1Q6PI26 577 aaKnown RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 ASB18Q6ZVZ8 466 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 ATG4DQ86TL0 474 aaPredicted RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 ZDHHC13Q8IUH4 622 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 EPHX4Q8IUS5 362 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 SVOPLQ8N434 492 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 ELOA3Q8NG57 546 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 MPP4Q96JB8 637 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 FUZQ9BT04 418 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 UBQLN3Q9H347 655 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 PRORYQ9H606 182 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 PDP1Q9P0J1 537 aaPredicted RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 STOML1Q9UBI4 398 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 B4GALT7Q9UBV7 327 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 OSGIN1Q9UJX0 560 aa12.15□□□□□ -0.47
ATF3-208ENST00000465155 RPH3AQ9Y2J0 694 aaPredicted RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 MAGED1Q9Y5V3 778 aaPredicted RBP12.15□□□□□ -0.47
ATF3-208ENST00000465155 FREM3P0C091 2139 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 A0A087WUJ7 227 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 A0A087WUU8 490 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 A0A087WZY1 265 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 SH3PXD2BA1X283 911 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 PDLIM1O00151 329 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 CASQ2O14958 399 aaPredicted RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 CCNB2O95067 398 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 PNMTP11086 282 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 HK1P19367 917 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 CCNA2P20248 432 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 PRKACGP22612 351 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 CXCR1P25024 350 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 SRD5A2P31213 254 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 HTR3AP46098 478 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 POLR2HP52434 150 aaKnown RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 GK3PQ14409 553 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 SEC23BQ15437 767 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 SNCBQ16143 134 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 MICAQ29983 383 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 SLC25A53Q5H9E4 307 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 OTUD3Q5T2D3 398 aaPredicted RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 TBPL2Q6SJ96 375 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 ZNF730Q6ZMV8 503 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 Q6ZS92 163 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 STK32CQ86UX6 486 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 HIPK1Q86Z02 1210 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 RBMXL3Q8N7X1 1067 aaKnown RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 ZFP62Q8NB50 900 aaPredicted RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 FAM98AQ8NCA5 519 aaKnown RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 OR5M1Q8NGP8 315 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 NRG4Q8WWG1 115 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 ACOT11Q8WXI4 607 aaPredicted RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 ZBTB8AQ96BR9 441 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 SDCCAG3Q96C92 435 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 MRGPRX4Q96LA9 322 aa12.14□□□□□ -0.47
ATF3-208ENST00000465155 ZNF703Q9H7S9 590 aaPredicted RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 ZNF71Q9NQZ8 489 aaPredicted RBP12.14□□□□□ -0.47
ATF3-208ENST00000465155 TMED7-TICAM2A0A0A6YYA0 188 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 ETV2O00321 342 aaPredicted RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 ZIC3O60481 467 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 TRAPPC6AO75865 159 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 GLSO94925 669 aaPredicted RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 EIF1P41567 113 aaKnown RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 LSM11P83369 360 aaKnown RBP eCLIP12.13□□□□□ -0.47
ATF3-208ENST00000465155 PMP22Q01453 160 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 OGFRL1Q5TC84 451 aaPredicted RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 TTC33Q6PID6 262 aaPredicted RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 C19orf48Q6RUI8 117 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 LINC00114Q6XXX2 140 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 RRM2BQ7LG56 351 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 TMEM251Q8N6I4 163 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 OR4K5Q8NGD3 323 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 OR9Q2Q8NGE9 314 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 OR14L1PQ8NHC6 308 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 C9orf43Q8TAL5 461 aaPredicted RBP12.13□□□□□ -0.47
ATF3-208ENST00000465155 POC1BQ8TC44 478 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 GIPC3Q8TF64 312 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 TMEM239Q8WW34 195 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 NRBF2Q96F24 287 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 C9orf16Q9BUW7 83 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 C12orf10Q9HB07 376 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 B3GNT3Q9Y2A9 372 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 TMED7Q9Y3B3 224 aa12.13□□□□□ -0.47
ATF3-208ENST00000465155 ATMQ13315 3056 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms