RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 PRSS27Q9BQR3 290 aa11.58□□□□□ -0.56
SUPT20H-204ENST00000464572 B4GALT7Q9UBV7 327 aa11.58□□□□□ -0.56
SUPT20H-204ENST00000464572 OSGIN1Q9UJX0 560 aa11.58□□□□□ -0.56
SUPT20H-204ENST00000464572 MAGED1Q9Y5V3 778 aaPredicted RBP11.58□□□□□ -0.56
SUPT20H-204ENST00000464572 MAP1BP46821 2468 aaKnown RBP11.58□□□□□ -0.56
SUPT20H-204ENST00000464572 FAM166BA8MTA8 275 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ZIC3O60481 467 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 TRAPPC6AO75865 159 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 CCNA2P20248 432 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 LIMS1P48059 325 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 FOXK2Q01167 660 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 PMP22Q01453 160 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 TRIP10Q15642 601 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 TBPL2Q6SJ96 375 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ATG4DQ86TL0 474 aaPredicted RBP11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 OR4C15Q8NGM1 316 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 OR5M1Q8NGP8 315 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 TMEM255BQ8WV15 326 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 BARD1Q99728 777 aaKnown RBP11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 CIB1Q99828 191 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ZNF703Q9H7S9 590 aaPredicted RBP11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 TMCC3Q9ULS5 477 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 B3GNT3Q9Y2A9 372 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 FREM3P0C091 2139 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ELOA3DA6NLF2 546 aaPredicted RBP11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 FPR1P21462 350 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 SRD5A2P31213 254 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ARHGDIAP52565 204 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 LSM11P83369 360 aaKnown RBP eCLIP11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 SEC23BQ15437 767 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 LRRC36Q1X8D7 754 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ELOA3BQ3SY89 546 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 SWT1Q5T5J6 900 aaKnown RBP11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 PODNL1Q6PEZ8 512 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 TMEM251Q8N6I4 163 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 FAM98AQ8NCA5 519 aaKnown RBP11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ELOA3Q8NG57 546 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 MPP4Q96JB8 637 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 CNTNAP3BQ96NU0 1288 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 CNTNAP3Q9BZ76 1288 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 ANKRD19PQ9H560 264 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 NCKAP5O14513 1909 aa11.57□□□□□ -0.56
SUPT20H-204ENST00000464572 A0A087WUJ7 227 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 A0A087WUU8 490 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 A0A087WZY1 265 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 G3V2T6 193 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PDLIM1O00151 329 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 GLSO94925 669 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PRKACGP22612 351 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 CXCR1P25024 350 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 MAGEA5P43359 124 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 HTR3AP46098 478 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 POLR2HP52434 150 aaKnown RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PPIAP62937 165 aaKnown RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 LPCAT4Q643R3 524 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 ZNF730Q6ZMV8 503 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 YRDCQ86U90 279 aaKnown RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 ADGRG3Q86Y34 549 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 ZDHHC13Q8IUH4 622 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 OR5K1Q8NHB7 308 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 POC1BQ8TC44 478 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 ZBTB8AQ96BR9 441 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 MRGPRX4Q96LA9 322 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PDP1Q9P0J1 537 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 TUBD1Q9UJT1 453 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PRDM4Q9UKN5 801 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 ETV2O00321 342 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PNMTP11086 282 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PLEKHN1Q494U1 663 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 SLC25A53Q5H9E4 307 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 RNFT1Q5M7Z0 435 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 OTUD3Q5T2D3 398 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 RAET1LQ5VY80 246 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 SHQ1Q6PI26 577 aaKnown RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 LINC00114Q6XXX2 140 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 RRM2BQ7LG56 351 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 SLC22A16Q86VW1 577 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 P3H2Q8IVL5 708 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 FAM83FQ8NEG4 500 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 OR14L1PQ8NHC6 308 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 EME1Q96AY2 570 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 FUZQ9BT04 418 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 ADNPQ9H2P0 1102 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PKD1L2Q7Z442 2459 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 MED12Q93074 2177 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 TMED7-TICAM2A0A0A6YYA0 188 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 SH3PXD2BA1X283 911 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 RASAL1O95294 804 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 PEX2P28328 305 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 APOBEC1P41238 236 aaKnown RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 EIF1P41567 113 aaKnown RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 MICAQ29983 383 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 HYAL4Q2M3T9 481 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 STK32CQ86UX6 486 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 EPHX4Q8IUS5 362 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 OR4K5Q8NGD3 323 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 TMEM239Q8WW34 195 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 ACOT11Q8WXI4 607 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 RELTQ969Z4 430 aa11.56□□□□□ -0.56
SUPT20H-204ENST00000464572 UBL7Q96S82 380 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms