RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KCTD18Q6PI47 426 aaPredicted RBP8.46□□□□□ -1.06
HPS4-208ENST00000464362 GDF7Q7Z4P5 450 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 ZNF584Q8IVC4 421 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 PFN4Q8NHR9 129 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 ELP4Q96EB1 424 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 TXNDC15Q96J42 360 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 G6PC3Q9BUM1 346 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 METTL7AQ9H8H3 244 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 FGF22Q9HCT0 170 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 DIMT1Q9UNQ2 313 aaKnown RBP8.46□□□□□ -1.06
HPS4-208ENST00000464362 ZAR1LA6NP61 321 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 YY2O15391 372 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 RFPL3O75679 317 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 CHRM4P08173 479 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 H2BFMP0C1H6 154 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 HOXA9P31269 272 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PSPHP78330 225 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 OR7E24Q6IFN5 339 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 FAHD1Q6P587 224 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 ABHD17CQ6PCB6 329 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 ZNF322Q6U7Q0 402 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 ALKAL2Q6UX46 152 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 APOOLQ6UXV4 268 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 CALHM3Q86XJ0 350 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 STX12Q86Y82 276 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 LACC1Q8IV20 430 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 OR2T4Q8NH00 348 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 SYNPRQ8TBG9 265 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 GCDHQ92947 438 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 SLC25A44Q96H78 314 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 ELF4Q99607 663 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 WDR77Q9BQA1 342 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 ZNF701Q9NV72 531 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 SLC35A3Q9Y2D2 325 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 CACNA1GO43497 2377 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 C17orf113A0A1B0GUU1 675 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 A0A1B0GVI7 797 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 GOSR2O14653 212 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 SLC22A5O76082 557 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 TPPPO94811 219 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 CFIP05156 583 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 FOSL1P15407 271 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 SGCAQ16586 387 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 DUSP5Q16690 384 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 C3orf38Q5JPI3 329 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PHF19Q5T6S3 580 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 ZNF283Q8N7M2 679 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 NANOGP1Q8N7R0 232 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 AMER3Q8N944 861 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 LGALS14Q8TCE9 139 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 GIMAP1Q8WWP7 306 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 CNOT9Q92600 299 aaKnown RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 ZG16BQ96DA0 208 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 SFXN1Q9H9B4 322 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PDE7BQ9NP56 450 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PRODH2Q9UF12 536 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 GPN3Q9UHW5 284 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 CHST2Q9Y4C5 530 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PTPRFP10586 1907 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PRSS38A1L453 326 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 LRIT2A6NDA9 550 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 AKR7A2O43488 359 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 TLX3O43711 291 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 PRAMEF4O60810 478 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 OR7A10O76100 309 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PBX2P40425 430 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 AQP2P41181 271 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 OR1D4P47884 311 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 COL28A1Q2UY09 1125 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 PRAMEF9Q5VWM5 478 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 SFXN4Q6P4A7 337 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 ZNF767PQ75MW2 155 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 LRRC28Q86X40 367 aaPredicted RBP8.45□□□□□ -1.06
HPS4-208ENST00000464362 TMEM99Q8N816 258 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 OR4K17Q8NGC6 315 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 CCL4L1Q8NHW4 92 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 POTEKPQ9BYX7 375 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 ZBP1Q9H171 429 aa8.45□□□□□ -1.06
HPS4-208ENST00000464362 POM121BA6NF01 834 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 LSSP48449 732 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 RRAS2P62070 204 aaPredicted RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 FABP5Q01469 135 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 RNASE10Q5GAN6 216 aaKnown RBP8.44□□□□□ -1.06
HPS4-208ENST00000464362 SLC22A10Q63ZE4 541 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 ULK3Q6PHR2 472 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 ZNF765Q7L2R6 523 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 CD163Q86VB7 1156 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 C12orf40Q86WS4 652 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 UCN3Q969E3 161 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 LYSMD1Q96S90 227 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 SERINC2Q96SA4 455 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 MNTQ99583 582 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 PLA2G12AQ9BZM1 189 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 SLA2Q9H6Q3 261 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 SDHAF3Q9NRP4 125 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 PARPBPQ9NWS1 579 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 KCNE3Q9Y6H6 103 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 QSER1Q2KHR3 1735 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 MYOFQ9NZM1 2061 aa8.44□□□□□ -1.06
HPS4-208ENST00000464362 NRXN2Q9P2S2 1712 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms