RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 DIO2Q92813 273 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 PNPLA2Q96AD5 504 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 EXOSC8Q96B26 276 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 RBM18Q96H35 190 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 KLHL15Q96M94 604 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 AMDHD1Q96NU7 426 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 DDOQ99489 341 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 RIOK2Q9BVS4 552 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 REG4Q9BYZ8 158 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 PIGMQ9H3S5 423 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 MTHFD2LQ9H903 347 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 NOX3Q9HBY0 568 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 NRIP3Q9NQ35 241 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 BIN3Q9NQY0 253 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SIRT3Q9NTG7 399 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 HPF1Q9NWY4 346 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 MARCH5Q9NX47 278 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF69Q9UC07 566 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 GPN3Q9UHW5 284 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC35A3Q9Y2D2 325 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 MRPS7Q9Y2R9 242 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 GPR52Q9Y2T5 361 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 YIPF1Q9Y548 306 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 KLF2Q9Y5W3 355 aaPredicted RBP6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 DOCK6Q96HP0 2047 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 NINQ8N4C6 2090 aa6.67□□□□□ -1.34
CLSTN1-204ENST00000464286 TBC1D3EA0A087X179 549 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 TBC1D3KA0A087X1G2 549 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 KANTRA0A1W2PQU2 76 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 PQLC2LA1A4F0 135 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RAB19A4D1S5 217 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR14I1A6ND48 311 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 TBC1D3BA6NDS4 549 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 TBC1D3FA6NER0 549 aaPredicted RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 MANSC4A6NHS7 340 aaPredicted RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SAP18O00422 153 aaKnown RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 PLPP1O14494 284 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OGG1O15527 345 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 KLF4O43474 513 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 LANCL1O43813 399 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RAD1O60671 282 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SH3BGRLO75368 114 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 ABLIM3O94929 683 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 FGF19O95750 216 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 AK1P00568 194 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 APOC1P02654 83 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 MT-ND4P03905 459 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 CTSBP07858 339 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 CD3GP09693 182 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 TACSTD2P09758 323 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR2T7P0C7T2 308 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 GABRA1P14867 456 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 MGMTP16455 207 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SPINK2P20155 84 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SHC1P29353 583 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SSTR2P30874 369 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC6A6P31641 620 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR1D2P34982 312 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 BSGP35613 385 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC11A1P49279 550 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 STARP49675 285 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 NCBP2P52298 156 aaKnown RBP eCLIP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 DGKEP52429 567 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 ART1P52961 327 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RPS26P62854 115 aaKnown RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 DGCR2P98153 550 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 FOXD4Q12950 439 aaPredicted RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 HLXQ14774 488 aaPredicted RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RBMS2Q15434 407 aaKnown RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SYPL1Q16563 259 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 CLEC12AQ5QGZ9 265 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 TMEM69Q5SWH9 247 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SHEQ5VZ18 495 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 TBC1D3GQ6DHY5 549 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 DMKNQ6E0U4 476 aaPredicted RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC25A25Q6KCM7 469 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC30A6Q6NXT4 461 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SEZ6L2Q6UXD5 910 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RAB11FIP2Q7L804 512 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SHFQ7M4L6 423 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 TRMT11Q7Z4G4 463 aaKnown RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 WDR53Q7Z5U6 358 aaPredicted RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RNF180Q86T96 592 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 FAM129CQ86XR2 697 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RBM45Q8IUH3 476 aaKnown RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 CFAP206Q8IYR0 622 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SVBPQ8N300 66 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 DNAAF1Q8NEP3 725 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 PXT1Q8NFP0 134 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR4D11Q8NGI4 311 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR52H1Q8NGJ2 320 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR2T27Q8NH04 317 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR4Q3Q8NH05 313 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 GANCQ8TET4 914 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 RIT1Q92963 219 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SMIM19Q96E16 107 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC41A3Q96GZ6 507 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 C10orf90Q96M02 699 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 LINC00052Q96N35 136 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 MCHR1Q99705 422 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms