RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF845Q96IR2 970 aaPredicted RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 CCDC106Q9BWC9 280 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 NSRP1Q9H0G5 558 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 CAPN7Q9Y6W3 813 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 UTP20O75691 2785 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 PRORSD1PA6NEY8 169 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 H0YC42 278 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 CXCL13O43927 109 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 CCDC22O60826 627 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 SS18L1O75177 396 aaPredicted RBP11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 GOSR1O95249 250 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 CD8BP10966 210 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC7A1P30825 629 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 PRKAR1BP31321 381 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 TPD52P55327 224 aaPredicted RBP11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 FOXF2Q12947 444 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 RNPS1Q15287 305 aaKnown RBP11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF239Q16600 458 aaKnown RBP11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 TMEM176BQ3YBM2 270 aaPredicted RBP11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 DHRS4L2Q6PKH6 230 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC43A2Q8N370 569 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 HIPK4Q8NE63 616 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 REXO5Q96IC2 774 aaKnown RBP11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF607Q96SK3 696 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 TRIM8Q9BZR9 551 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 CHRNA9Q9UGM1 479 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 ANGPT4Q9Y264 503 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 EMC9Q9Y3B6 208 aa11.71□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF208O43345 1280 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 BCAS1O75363 584 aaPredicted RBP11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 NUDT7P0C024 238 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 IL11P20809 199 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 SLC6A2P23975 617 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 SLC1A3P43003 542 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 POLR2HP52434 150 aaKnown RBP11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 RAC3P60763 192 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 CSNK2A1P68400 391 aaPredicted RBP11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 MCEMP1Q8IX19 187 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 C11orf65Q8NCR3 313 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 OR8J3Q8NGG0 315 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 OR6K3Q8NGY3 331 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 RNF128Q8TEB7 428 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 COQ10BQ9H8M1 238 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.54
R3HDM1-213ENST00000463230 CLDN24A6NM45 220 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 EEF1E1-BLOC1S5C9J1V9 151 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 EEF1E1O43324 174 aaKnown RBP11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 SERPINB7O75635 380 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 SFTPDP35247 375 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 KIR2DL2P43627 348 aaPredicted RBP11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 IDH2P48735 452 aaKnown RBP11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 SCARB2Q14108 478 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 SYT14P1Q58G82 188 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 ZNF311Q5JNZ3 666 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 SERPINA11Q86U17 422 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 VRK2Q86Y07 508 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 GCNT2Q8N0V5 402 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 NFKBIDQ8NI38 313 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 FAM222BQ8WU58 562 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 TMEM185BQ9H7F4 350 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 GID8Q9NWU2 228 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 ELOVL5Q9NYP7 299 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 AP3M1Q9Y2T2 418 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 FBP2O00757 339 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 AQP8O94778 261 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 SHC1P29353 583 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 CTBP2P56545 445 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 COPZ1P61923 177 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 MMEL1Q495T6 779 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 RPS26P11Q5JNZ5 115 aaPredicted RBP11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 WBP2NLQ6ICG8 309 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 MAL2Q969L2 176 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 ZNF524Q96C55 264 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 RBM24Q9BX46 236 aaKnown RBP11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 ADAM19Q9H013 955 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 IKZF5Q9H5V7 419 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 FANCFQ9NPI8 374 aa11.7□□□□□ -0.54
R3HDM1-213ENST00000463230 A8MXE2 369 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 PMS2P2O95744 297 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 PLGP00747 810 aaPredicted RBP11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 CD1EP15812 388 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 UQCRC1P31930 480 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 RYKP34925 604 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 ACAA2P42765 397 aaKnown RBP11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 ADRM1Q16186 407 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 CYP51A1Q16850 503 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 TMPPEQ6ZT21 453 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 SPATA21Q7Z572 469 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 RP9Q8TA86 221 aaKnown RBP11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 DDIT4LQ96D03 193 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 ZHX1-C8orf76Q96EF9 292 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 SLC39A3Q9BRY0 314 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 KAT8Q9H7Z6 458 aaKnown RBP11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 CTPS2Q9NRF8 586 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 PROCRQ9UNN8 238 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms