RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ISPDA4D126 451 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 EFCAB9A8MZ26 197 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 PRR33A8MZF0 331 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CPNE3O75131 537 aaKnown RBP13.29□□□□□ -0.28
HDAC6-213ENST00000462730 HEXBP07686 556 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CCL4P13236 92 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 HPGDP15428 266 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CD40LGP29965 261 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 LIPAP38571 399 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 PPP5CP53041 499 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CTBP2P56545 445 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 SPEM2Q0P670 501 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CCDC157Q569K6 752 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 SLC29A4Q7RTT9 530 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 SLC22A16Q86VW1 577 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 BPHLQ86WA6 291 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF440Q8IYI8 595 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 OR2T33Q8NG76 320 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 OR1N1Q8NGS0 311 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 OR13C2Q8NGS9 318 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 BRIX1Q8TDN6 353 aaKnown RBP13.29□□□□□ -0.28
HDAC6-213ENST00000462730 PMEPA1Q969W9 287 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 TMEM80Q96HE8 168 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 WWTR1Q9GZV5 400 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 OR52D1Q9H346 318 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 MEPEQ9NQ76 525 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-213ENST00000462730 POLE4Q9NR33 117 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CACNA1HO95180 2353 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 IGHV3-20A0A0C4DH32 117 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 SCDO00767 359 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 SURF4O15260 269 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 OIP5O43482 229 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 REM1O75628 298 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 RFPL3O75679 317 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF28P17035 718 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 RBM34P42696 430 aaKnown RBP13.28□□□□□ -0.28
HDAC6-213ENST00000462730 NR0B1P51843 470 aaKnown RBP13.28□□□□□ -0.28
HDAC6-213ENST00000462730 CDC20Q12834 499 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 CD226Q15762 336 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 FNDC7Q5VTL7 733 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 ULK3Q6PHR2 472 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 TMPRSS11FQ6ZWK6 438 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 OR52L1Q8NGH7 329 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 MCFD2Q8NI22 146 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 OIT3Q8WWZ8 545 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 DACH2Q96NX9 599 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 ADOQ96SZ5 270 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 CPNE5Q9HCH3 593 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 TMEM9BQ9NQ34 198 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 SACM1LQ9NTJ5 587 aa13.28□□□□□ -0.28
HDAC6-213ENST00000462730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.27□□□□□ -0.28
HDAC6-213ENST00000462730 CDC14CA4D256 554 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 OR6C76A6NM76 312 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 IDSB3KWA1 339 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 GNB5O14775 395 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 NGFRP08138 427 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 SAGP10523 405 aaPredicted RBP13.27□□□□□ -0.28
HDAC6-213ENST00000462730 UBL4AP11441 157 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 IL12BP29460 328 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 CCKBRP32239 447 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 FXYD6P3P58550 94 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 NCF4Q15080 339 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 LCN10Q6JVE6 187 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 TUBA3EQ6PEY2 450 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 ANKRD37Q7Z713 158 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 FAM71CQ8NEG0 241 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 ANKK1Q8NFD2 765 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 PHOSPHO1Q8TCT1 267 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF426Q9BUY5 554 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 DCSTAMPQ9H295 470 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 UBQLN3Q9H347 655 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 SP140LQ9H930 580 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 ZBTB20Q9HC78 741 aaPredicted RBP13.27□□□□□ -0.28
HDAC6-213ENST00000462730 HHATLQ9HCP6 504 aa13.27□□□□□ -0.28
HDAC6-213ENST00000462730 KDM4EB2RXH2 506 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-213ENST00000462730 TNFRSF10AO00220 468 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 MEN1O00255 615 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 PRODHO43272 600 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 ICOSLGO75144 302 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 RCBTB2O95199 551 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 ONECUT2O95948 504 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 HMGN1P05114 100 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 HSMCR30P0CW71 290 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 ADH7P40394 386 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 CCR4P51679 360 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 COPZ1P61923 177 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 TUBA1BP68363 451 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 MC2RQ01718 297 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 PLCXD2Q0VAA5 305 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 ZNF404Q494X3 552 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 ARMCX4Q5H9R4 360 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 DESI1Q6ICB0 168 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 APOOLQ6UXV4 268 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 TUBA1AQ71U36 451 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 OVCH1Q7RTY7 1134 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 SLC34A3Q8N130 599 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 LSM14AQ8ND56 463 aaKnown RBP13.27□□□□□ -0.29
HDAC6-213ENST00000462730 OR52I1Q8NGK6 324 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 OR5M11Q96RB7 305 aa13.27□□□□□ -0.29
HDAC6-213ENST00000462730 ZNF229Q9UJW7 825 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms