RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MAT2BQ9NZL9 334 aa6.75□□□□□ -1.33
UBE4B-204ENST00000462658 C6orf203Q9P0P8 240 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-204ENST00000462658 TRPC4Q9UBN4 977 aa6.75□□□□□ -1.33
UBE4B-204ENST00000462658 C19orf53Q9UNZ5 99 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-204ENST00000462658 UBE2J1Q9Y385 318 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-204ENST00000462658 V9GYQ6 96 aa6.75□□□□□ -1.33
UBE4B-204ENST00000462658 CROCCQ5TZA2 2017 aa6.75□□□□□ -1.33
UBE4B-204ENST00000462658 AKAP13Q12802 2813 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 NUP214P35658 2090 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 TMEM247A6NEH6 219 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 C5orf58C9J3I9 102 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 M0QX08 132 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 PRYO14603 147 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 POLR1CO15160 346 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 PLOD3O60568 738 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 GCM2O75603 506 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 TIPRLO75663 272 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 ZNF682O95780 498 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 IFNA16P05015 189 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 BCHEP06276 602 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 IFI6P09912 130 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 TFPTP0C1Z6 253 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CT62P0C5K7 136 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CCL4P13236 92 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 MAOAP21397 527 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CCKBRP32239 447 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 KHKP50053 298 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 PDX1P52945 283 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 FAM3BP58499 235 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 IGLV3-21P80748 117 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 DCDP81605 110 aaKnown RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CHRNB3Q05901 458 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 ILKQ13418 452 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 SERTAD2Q14140 314 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 TIGD6Q17RP2 521 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 NKAIN1Q4KMZ8 207 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 C4orf46Q504U0 113 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 FAM98BQ52LJ0 330 aaKnown RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 FHL5Q5TD97 284 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 MFSD4BQ5TF39 518 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 REEP3Q6NUK4 255 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 JMJD6Q6NYC1 403 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 ENPP6Q6UWR7 440 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 DGAT2L6Q6ZPD8 337 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 LRRC74BQ6ZQY2 392 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CCDC80Q76M96 950 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 EIF3MQ7L2H7 374 aaKnown RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 GALNT10Q86SR1 603 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 SLC44A2Q8IWA5 706 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 ST13P4Q8IZP2 240 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 SLC38A9Q8NBW4 561 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 C7orf57Q8NEG2 295 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 OR5D16Q8NGK9 328 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 FAM110BQ8TC76 370 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 MIPOL1Q8TD10 442 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 ADAMTS15Q8TE58 950 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 RAB8BQ92930 207 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 RIT1Q92963 219 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 GIMAP5Q96F15 307 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 SLC47A1Q96FL8 570 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 TMEM19Q96HH6 336 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 PYURFQ96I23 114 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 RNF145Q96MT1 663 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 DGAT2Q96PD7 388 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 MS4A4EQ96PG1 132 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 OR7D2Q96RA2 312 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CTRCQ99895 268 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 PKP2Q99959 881 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 PELOQ9BRX2 385 aaKnown RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CHID1Q9BWS9 393 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 QTRT1Q9BXR0 403 aaKnown RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 NUAK2Q9H093 628 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 APMAPQ9HDC9 416 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 MKKSQ9NPJ1 570 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 EQTNQ9NQ60 294 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 FBXO8Q9NRD0 319 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 ADPRHL2Q9NX46 363 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 AKAP7Q9P0M2 348 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 KLHL13Q9P2N7 655 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 RPS6KA6Q9UK32 745 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 SAMD4AQ9UPU9 718 aaKnown RBP6.74□□□□□ -1.33
UBE4B-204ENST00000462658 ANGPT4Q9Y264 503 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 MMACHCQ9Y4U1 282 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 CLDN16Q9Y5I7 305 aa6.74□□□□□ -1.33
UBE4B-204ENST00000462658 MED19A0JLT2 244 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 CGB1A6NKQ9 187 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 DUXAA6NLW8 204 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 TMX2-CTNND1H3BSU7 103 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 SLC28A2O43868 658 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 TPST1O60507 370 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 NME6O75414 186 aaPredicted RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 PGM3O95394 542 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 IFNA14P01570 189 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 NR2F1P10589 423 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 HOXB6P17509 224 aaKnown RBP6.73□□□□□ -1.33
UBE4B-204ENST00000462658 TNNI3P19429 210 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 S1PR1P21453 382 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 FASP25445 335 aa6.73□□□□□ -1.33
UBE4B-204ENST00000462658 AQP1P29972 269 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms