RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SELENBP1Q13228 472 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 TRIM25Q14258 630 aaKnown RBP10.63□□□□□ -0.71
CPNE1-221ENST00000462352 C1QL3Q5VWW1 255 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 ZNF585AQ6P3V2 769 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 C3P1Q6ZMU1 363 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 CCDC121Q6ZUS5 278 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 VTCN1Q7Z7D3 282 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 RANBP3LQ86VV4 465 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-221ENST00000462352 CARM1Q86X55 608 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 ADGRG3Q86Y34 549 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 ULK2Q8IYT8 1036 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 LILRA2Q8N149 483 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 LSMEM1Q8N8F7 131 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 OR52E4Q8NGH9 312 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 C3orf49Q96BT1 292 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 HSH2DQ96JZ2 352 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 NSMCE2Q96MF7 247 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 MCHR1Q99705 422 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 ZNF559Q9BR84 538 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 CADM1Q9BY67 442 aaKnown RBP10.63□□□□□ -0.71
CPNE1-221ENST00000462352 TRIM2Q9C040 744 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 ADAM19Q9H013 955 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 SERINC1Q9NRX5 453 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 DCAF13Q9NV06 445 aaKnown RBP10.63□□□□□ -0.71
CPNE1-221ENST00000462352 ALKBH4Q9NXW9 302 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 STOML1Q9UBI4 398 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 RPS6KB2Q9UBS0 482 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 OSGIN1Q9UJX0 560 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 RPS6KA6Q9UK32 745 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 SAMD4AQ9UPU9 718 aaKnown RBP10.63□□□□□ -0.71
CPNE1-221ENST00000462352 SLC9A8Q9Y2E8 581 aa10.63□□□□□ -0.71
CPNE1-221ENST00000462352 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 TMED7-TICAM2A0A0A6YYA0 188 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 A0A1B0GWA3 101 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 FIGNL2A6NMB9 653 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 H0Y3Z8 333 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 WDR1O75083 606 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 ATP6V1B2P21281 511 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 CA7P43166 264 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 OR1E2P47887 323 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 SUCLG1P53597 346 aaKnown RBP10.62□□□□□ -0.71
CPNE1-221ENST00000462352 CASP6P55212 293 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 MS4A2Q01362 244 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 GTF3C1Q12789 2109 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 OR1Q1Q15612 314 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 C3orf33Q6P1S2 294 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 PGM2L1Q6PCE3 622 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 CYP2R1Q6VVX0 501 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 FKBP9P1Q75LS8 142 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 GGNQ86UU5 652 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 LSRQ86X29 649 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-221ENST00000462352 EID3Q8N140 333 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 MEIOBQ8N635 442 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 ATP6V1C2Q8NEY4 427 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 RELTQ969Z4 430 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 MCUR1Q96AQ8 359 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 CCDC124Q96CT7 223 aaKnown RBP10.62□□□□□ -0.71
CPNE1-221ENST00000462352 ASB9Q96DX5 294 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 ADGRG7Q96K78 797 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 KLHL15Q96M94 604 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 LRMDAQ9H2I8 198 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 TP63Q9H3D4 680 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-221ENST00000462352 MUC13Q9H3R2 512 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 TMEM27Q9HBJ8 222 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 ACTR3BQ9P1U1 418 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 CHRNA9Q9UGM1 479 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 TMED7Q9Y3B3 224 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 RELNP78509 3460 aa10.62□□□□□ -0.71
CPNE1-221ENST00000462352 ESPL1Q14674 2120 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 A0A0B4J2E0 115 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 A0A0J9YW62 118 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 A0A1B0GX12 115 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 TMEM72A0PK05 275 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 CPSF4LA6NMK7 179 aaKnown RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 GJE1A6NN92 205 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 AHRRA9YTQ3 701 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 EIF1AYO14602 144 aaKnown RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 PRKD3O94806 890 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 GABRA1P14867 456 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 CCNA2P20248 432 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 CXCR1P25024 350 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 ACVR2AP27037 513 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 SHC1P29353 583 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 SFTPDP35247 375 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 PTGER4P35408 488 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 CTU2Q2VPK5 515 aaKnown RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 TMEM176BQ3YBM2 270 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 ACSF3Q4G176 576 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 IFI44LQ53G44 452 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 ENTPD8Q5MY95 495 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 RTL6Q6ICC9 239 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 LCN8Q6JVE9 175 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 ULK3Q6PHR2 472 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 DEF8Q6ZN54 512 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 ESPNLQ6ZVH7 1005 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 ATG4DQ86TL0 474 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 TSPYL5Q86VY4 417 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 DHFR2Q86XF0 187 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 RPRMLQ8N4K4 120 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 FAM86B1Q8N7N1 296 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms