RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SERINC1Q9NRX5 453 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ACER3Q9NUN7 267 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ARGLU1Q9NWB6 273 aaPredicted RBP9.07□□□□□ -0.96
SF3A3-204ENST00000462258 KLHL9Q9P2J3 617 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 CHRNA9Q9UGM1 479 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 SPIN1Q9Y657 262 aaPredicted RBP9.07□□□□□ -0.96
SF3A3-204ENST00000462258 FAM234BA2RU67 622 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 AGAP5A6NIR3 686 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 SMAD9O15198 467 aaKnown RBP9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ADAM11O75078 769 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 PRKD3O94806 890 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 BCHEP06276 602 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 DBIP07108 87 aaKnown RBP9.06□□□□□ -0.96
SF3A3-204ENST00000462258 FESP07332 822 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ZCCHC18P0CG32 403 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ETFAP13804 333 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 PPP3CBP16298 524 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ENPP1P22413 925 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 APOBEC1P41238 236 aaKnown RBP9.06□□□□□ -0.96
SF3A3-204ENST00000462258 MVDP53602 400 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 DSTNP60981 165 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 KCNJ10P78508 379 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 GNA13Q14344 377 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 MRPL2Q5T653 305 aaKnown RBP9.06□□□□□ -0.96
SF3A3-204ENST00000462258 AP1ARQ63HQ0 302 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ANKRD34AQ69YU3 496 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ABLIM2Q6H8Q1 611 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 TFAP2EQ6VUC0 442 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 STAC2Q6ZMT1 411 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 GRINAQ7Z429 371 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 TUSC5Q8IXB3 177 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 SLC43A2Q8N370 569 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 CNOT9Q92600 299 aaKnown RBP9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ZG16BQ96DA0 208 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 MBD6Q96DN6 1003 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 AURKBQ96GD4 344 aaPredicted RBP9.06□□□□□ -0.96
SF3A3-204ENST00000462258 PSD2Q9BQI7 771 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 EBF4Q9BQW3 602 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 CCDC106Q9BWC9 280 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 ACTR6Q9GZN1 396 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 TPT1P8Q9HAU6 139 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 CTPS2Q9NRF8 586 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 FREM1Q5H8C1 2179 aa9.06□□□□□ -0.96
SF3A3-204ENST00000462258 DSPPQ9NZW4 1301 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 HMGB1P1B2RPK0 211 aaPredicted RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 AP3D1O14617 1153 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 CYTIPO60759 359 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 TGDSO95455 350 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 YES1P07947 543 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 TFPIP10646 304 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 UQCRBP14927 111 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 IL7RP16871 459 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 KLK2P20151 261 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 PSMB1P20618 241 aaKnown RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 CRATP43155 626 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 IDH2P48735 452 aaKnown RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 MRPL19P49406 292 aaKnown RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 DIO1P49895 249 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 CRISP3P54108 245 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 PPP2R2AP63151 447 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 CSNK2A1P68400 391 aaPredicted RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 MAPK11Q15759 364 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 DEFB113Q30KQ7 82 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 LIN52Q52LA3 116 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 SLC2A7Q6PXP3 512 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 ZNF836Q6ZNA1 936 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 HDXQ7Z353 690 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 NUFIP2Q7Z417 695 aaKnown RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 PEX5LQ8IYB4 626 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 ZHX1-C8orf76Q96EF9 292 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 TMEM19Q96HH6 336 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 BCO1Q9HAY6 547 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 INTS9Q9NV88 658 aaKnown RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 CALML5Q9NZT1 146 aa9.05□□□□□ -0.96
SF3A3-204ENST00000462258 ING1Q9UK53 422 aaPredicted RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 FLNAP21333 2647 aaKnown RBP9.05□□□□□ -0.96
SF3A3-204ENST00000462258 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 TMEM247A6NEH6 219 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 CFAP73A6NFT4 308 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 SULT2B1O00204 365 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 NR5A2O00482 541 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 FAAHO00519 579 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 GCM2O75603 506 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 PMS2P2O95744 297 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 THBDP07204 575 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 H2AFXP16104 143 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 CD53P19397 219 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 HTR3AP46098 478 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 IDH3AP50213 366 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 POLR2HP52434 150 aaKnown RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 AQP5P55064 265 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 RASGEF1BQ0VAM2 473 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 EPS8Q12929 822 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 BEX5Q5H9J7 111 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 RNF220Q5VTB9 566 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 TMPPEQ6ZT21 453 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 C22orf34Q6ZV56 151 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 CXorf67Q86X51 503 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms