RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TRNT1Q96Q11 434 aaKnown RBP16.84■□□□□ 0.29
VARS-220ENST00000461874 PSD2Q9BQI7 771 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 CCDC106Q9BWC9 280 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 MANSC1Q9H8J5 431 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 TMBIM4Q9HC24 238 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 EXOSC3Q9NQT5 275 aaKnown RBP16.84■□□□□ 0.29
VARS-220ENST00000461874 LIPT1Q9Y234 373 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 SMAD9O15198 467 aaKnown RBP16.83■□□□□ 0.28
VARS-220ENST00000461874 CYTIPO60759 359 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 ERLIN1O75477 346 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 GSNP06396 782 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 RYKP34925 604 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 APOBEC1P41238 236 aaKnown RBP16.83■□□□□ 0.28
VARS-220ENST00000461874 DIO1P49895 249 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 NR1H2P55055 460 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 PLAURQ03405 335 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 RASGEF1BQ0VAM2 473 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 SYPL1Q16563 259 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 SYT14P1Q58G82 188 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 BEND6Q5SZJ8 279 aaPredicted RBP16.83■□□□□ 0.28
VARS-220ENST00000461874 SFRP5Q5T4F7 317 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 NXNQ6DKJ4 435 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 ZNF563Q8TA94 476 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 S100PBPQ96BU1 408 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 MAELQ96JY0 434 aaKnown RBP16.83■□□□□ 0.28
VARS-220ENST00000461874 CCL19Q99731 98 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 SLC38A1Q9H2H9 487 aa16.83■□□□□ 0.28
VARS-220ENST00000461874 FREM1Q5H8C1 2179 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 NIPBLQ6KC79 2804 aaeCLIP16.82■□□□□ 0.28
VARS-220ENST00000461874 AGAP5A6NIR3 686 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 CLDN24A6NM45 220 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 ZNF814B7Z6K7 855 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 ARHGEF9O43307 516 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 ADAP00813 363 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 IL6P05231 212 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 CHRM4P08173 479 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 IDO1P14902 403 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 ANXA11P50995 505 aaKnown RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 CSNK2A1P68400 391 aaPredicted RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 P2RY6Q15077 328 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 PDCD4Q53EL6 469 aaKnown RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 COX20Q5RI15 118 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 ZNF704Q6ZNC4 412 aaPredicted RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 LRRC74BQ6ZQY2 392 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 GRINAQ7Z429 371 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 MAVSQ7Z434 540 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 CMIPQ8IY22 773 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 ARFGAP2Q8N6H7 521 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 ZNF75CPQ92670 426 aaPredicted RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 PLPPR2Q96GM1 343 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 TMEM204Q9BSN7 226 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 GSX1Q9H4S2 264 aaPredicted RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 MTHFD2LQ9H903 347 aaPredicted RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 CTPS2Q9NRF8 586 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 CHRNA9Q9UGM1 479 aa16.82■□□□□ 0.28
VARS-220ENST00000461874 SPIN1Q9Y657 262 aaPredicted RBP16.82■□□□□ 0.28
VARS-220ENST00000461874 ZNF724A8MTY0 619 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 SULT2B1O00204 365 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 RFXANKO14593 260 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 ADAM11O75078 769 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 SLC22A3O75751 556 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 PLAUP00749 431 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 FESP07332 822 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 IL32P24001 234 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 OR3A2P47893 321 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 TSC22D1Q15714 1073 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 SLC9B1Q4ZJI4 515 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 MTDHQ86UE4 582 aaKnown RBP16.81■□□□□ 0.28
VARS-220ENST00000461874 P3H2Q8IVL5 708 aa16.81■□□□□ 0.28
VARS-220ENST00000461874 PNPT1Q8TCS8 783 aaKnown RBP16.81■□□□□ 0.28
VARS-220ENST00000461874 CNOT9Q92600 299 aaKnown RBP16.81■□□□□ 0.28
VARS-220ENST00000461874 KISS1RQ969F8 398 aaPredicted RBP16.81■□□□□ 0.28
VARS-220ENST00000461874 ZNF775Q96BV0 537 aaPredicted RBP16.81■□□□□ 0.28
VARS-220ENST00000461874 ZNF300Q96RE9 604 aaPredicted RBP16.81■□□□□ 0.28
VARS-220ENST00000461874 KLF11O14901 512 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 KRT75O95678 551 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 TFPIP10646 304 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 RPS4Y1P22090 263 aaKnown RBP16.8■□□□□ 0.28
VARS-220ENST00000461874 FKBP2P26885 142 aaKnown RBP16.8■□□□□ 0.28
VARS-220ENST00000461874 MAGEA8P43361 318 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 IDH2P48735 452 aaKnown RBP16.8■□□□□ 0.28
VARS-220ENST00000461874 ITGADQ13349 1161 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 GSTA3Q16772 222 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 Q5PR19 223 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 Q6ZT83 130 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 ADGRG3Q86Y34 549 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 PIWIL2Q8TC59 973 aaKnown RBP16.8■□□□□ 0.28
VARS-220ENST00000461874 IGFBPL1Q8WX77 278 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 HSD17B8Q92506 261 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 PMM1Q92871 262 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 USB1Q9BQ65 265 aaKnown RBP16.8■□□□□ 0.28
VARS-220ENST00000461874 SDR39U1Q9NRG7 319 aaPredicted RBP16.8■□□□□ 0.28
VARS-220ENST00000461874 SLC6A13Q9NSD5 602 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 ZIM2Q9NZV7 527 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 HDGFL3Q9Y3E1 203 aa16.8■□□□□ 0.28
VARS-220ENST00000461874 DSCAMO60469 2012 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 IGKV3D-15A0A087WSY6 115 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 AP3D1O14617 1153 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 PMS2P2O95744 297 aa16.79■□□□□ 0.28
VARS-220ENST00000461874 NR2F1P10589 423 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms