RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 MERTKQ12866 999 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 NFYCQ13952 458 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 SELPLGQ14242 412 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 ZNF141Q15928 474 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 ZNF630Q2M218 657 aaPredicted RBP10.08□□□□□ -0.8
APTX-209ENST00000460940 KLHL26Q53HC5 615 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 DLEU7Q6UYE1 221 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 MARCH3Q86UD3 253 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 RETREG3Q86VR2 466 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 CIB1Q99828 191 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 SAP130Q9H0E3 1048 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 SEMA6AQ9H2E6 1030 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 PTGES2Q9H7Z7 377 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 ZNF835Q9Y2P0 537 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 TMA7Q9Y2S6 64 aaKnown RBP10.08□□□□□ -0.8
APTX-209ENST00000460940 MRPS18CQ9Y3D5 142 aaKnown RBP10.08□□□□□ -0.8
APTX-209ENST00000460940 SNX13Q9Y5W8 968 aa10.08□□□□□ -0.8
APTX-209ENST00000460940 ISPDA4D126 451 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 C2orf72A6NCS6 295 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 EVPLLA8MZ36 301 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 SOCS2O14508 198 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 TRAPPC6AO75865 159 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 NPPAP01160 153 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 C1QCP02747 245 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 STSP08842 583 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 CELA3AP09093 270 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 ETFAP13804 333 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 CD1EP15812 388 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 ABOP16442 354 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 M6PRP20645 277 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 S100A5P33763 92 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 PTGS2P35354 604 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 CASP6P55212 293 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 DSCR4P56555 118 aaPredicted RBP10.07□□□□□ -0.8
APTX-209ENST00000460940 GNG2P59768 71 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 STX5Q13190 355 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 RGNQ15493 299 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 GPAT3Q53EU6 434 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 PRAMEF8Q5VWM4 474 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 PRAMEF7Q5VXH5 474 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 GTF2IRD2BQ6EKJ0 949 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 TYW3Q6IPR3 259 aaKnown RBP10.07□□□□□ -0.8
APTX-209ENST00000460940 APOOLQ6UXV4 268 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 FRRS1Q6ZNA5 592 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 Q6ZPB1 254 aaPredicted RBP10.07□□□□□ -0.8
APTX-209ENST00000460940 GTF2IRD2Q86UP8 949 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 SPPL2CQ8IUH8 684 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 ARMC8Q8IUR7 673 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 ZNF619Q8N2I2 560 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 OR2M3Q8NG83 312 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 NEIL3Q8TAT5 605 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 CPPED1Q9BRF8 314 aaPredicted RBP10.07□□□□□ -0.8
APTX-209ENST00000460940 C9orf16Q9BUW7 83 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 LDAHQ9H6V9 325 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 A4GALTQ9NPC4 353 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 VAPAQ9P0L0 249 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 SLAMF8Q9P0V8 285 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 ENPP5Q9UJA9 477 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 DKKL1Q9UK85 242 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 TESMINQ9Y4I5 508 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 LIPGQ9Y5X9 500 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 ESPL1Q14674 2120 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 EML6Q6ZMW3 1958 aa10.07□□□□□ -0.8
APTX-209ENST00000460940 A0A1B0GTH9 108 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 PYCARD-AS1I3L0S3 204 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 BCKDKO14874 412 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 FCMRO60667 390 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 ZIC2O95409 532 aaPredicted RBP10.06□□□□□ -0.8
APTX-209ENST00000460940 NR2F1P10589 423 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 CRISP3P54108 245 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 SUMO3P55854 103 aaPredicted RBP10.06□□□□□ -0.8
APTX-209ENST00000460940 HSF1Q00613 529 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 TOMM20Q15388 145 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 GPR68Q15743 365 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 REP15Q6BDI9 236 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 FGD2Q7Z6J4 655 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 MFSD4AQ8N468 514 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 DUSP19Q8WTR2 217 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 SARAFQ96BY9 339 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 RTN4RQ9BZR6 473 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 SLC6A15Q9H2J7 730 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 DSN1Q9H410 356 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 EXO5Q9H790 373 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 FBXL2Q9UKC9 423 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 MKLN1Q9UL63 735 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 OSGIN2Q9Y236 505 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 HRH3Q9Y5N1 445 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 TENM4Q6N022 2769 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 NINQ8N4C6 2090 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
APTX-209ENST00000460940 A0A087WZY1 265 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 NPIPA5A0A0B4J1W7 369 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 A0A1B0GUH1 482 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 PRAMEF27A3QJZ7 478 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 SERINC4A6NH21 518 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 NPIPA7E9PJI5 369 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 PRRG2O14669 202 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 MRASO14807 208 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 TNFRSF21O75509 655 aa10.06□□□□□ -0.8
APTX-209ENST00000460940 UGT2B17O75795 530 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms