RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 KRT34O76011 436 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 TFPIP10646 304 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 CD1EP15812 388 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 PRKAR1BP31321 381 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 UQCRC1P31930 480 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 SLC1A3P43003 542 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 POLR2HP52434 150 aaKnown RBP14.49□□□□□ -0.09
CD28-203ENST00000458610 AGFG1P52594 562 aaKnown RBP14.49□□□□□ -0.09
CD28-203ENST00000458610 CTBP2P56545 445 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 RAC3P60763 192 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 CSNK2A1P68400 391 aaPredicted RBP14.49□□□□□ -0.09
CD28-203ENST00000458610 EPS8Q12929 822 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 FOXF2Q12947 444 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 SERPINA11Q86U17 422 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 GCNT2Q8N0V5 402 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 CNEP1R1Q8N9A8 125 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 ACBD4Q8NC06 268 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 RELL2Q8NC24 303 aaPredicted RBP14.49□□□□□ -0.09
CD28-203ENST00000458610 LRRC58Q96CX6 371 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 GMPPAQ96IJ6 420 aaPredicted RBP14.49□□□□□ -0.09
CD28-203ENST00000458610 CCDC106Q9BWC9 280 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 FANCFQ9NPI8 374 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 KLHL28Q9NXS3 571 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 JKAMPQ9P055 326 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 CHRNA9Q9UGM1 479 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 SLC13A4Q9UKG4 626 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 MED12Q93074 2177 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 PCNX3Q9H6A9 2034 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 ARHGAP21Q5T5U3 1957 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 FBP2O00757 339 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 MSTNO14793 375 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 MRASO14807 208 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 IGFBP2P18065 325 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 LSP1P33241 339 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 CPA2P48052 419 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 RNPS1Q15287 305 aaKnown RBP14.48□□□□□ -0.09
CD28-203ENST00000458610 INTS11Q5TA45 600 aaKnown RBP14.48□□□□□ -0.09
CD28-203ENST00000458610 WBP2NLQ6ICG8 309 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 NANOGP8Q6NSW7 305 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 FAM214BQ7L5A3 538 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 SNX32Q86XE0 403 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 DMRTC2Q8IXT2 367 aaPredicted RBP14.48□□□□□ -0.09
CD28-203ENST00000458610 SLC43A2Q8N370 569 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 OR8J3Q8NGG0 315 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 DDIT4LQ96D03 193 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 ZHX1-C8orf76Q96EF9 292 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 OR5B2Q96R09 309 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 ECSITQ9BQ95 431 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 SLC39A3Q9BRY0 314 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 TACO1Q9BSH4 297 aaKnown RBP14.48□□□□□ -0.09
CD28-203ENST00000458610 IKZF5Q9H5V7 419 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 KAT8Q9H7Z6 458 aaKnown RBP14.48□□□□□ -0.09
CD28-203ENST00000458610 NANOGQ9H9S0 305 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 GP6Q9HCN6 339 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 NPDC1Q9NQX5 325 aaPredicted RBP14.48□□□□□ -0.09
CD28-203ENST00000458610 RLIMQ9NVW2 624 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 AP3M1Q9Y2T2 418 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 HDGFL3Q9Y3E1 203 aa14.48□□□□□ -0.09
CD28-203ENST00000458610 ZNF208O43345 1280 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 BCAS1O75363 584 aaPredicted RBP14.47□□□□□ -0.09
CD28-203ENST00000458610 TNFSF13O75888 250 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 AQP8O94778 261 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 PRKD3O94806 890 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 CXCR1P25024 350 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 TACR3P29371 465 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 SSTR2P30874 369 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 PCYT1AP49585 367 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 SEC24CP53992 1094 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 MTPNP58546 118 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 GNGT1P63211 74 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 SYT14P1Q58G82 188 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 DHRS4L2Q6PKH6 230 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 PLXDC2Q6UX71 529 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 TMPPEQ6ZT21 453 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 GDF7Q7Z4P5 450 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 PATL1Q86TB9 770 aaKnown RBP14.47□□□□□ -0.09
CD28-203ENST00000458610 ADGRG3Q86Y34 549 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 ARMC8Q8IUR7 673 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 CLIP4Q8N3C7 705 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 C14orf79Q96F83 325 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 RBM24Q9BX46 236 aaKnown RBP14.47□□□□□ -0.09
CD28-203ENST00000458610 CTPS2Q9NRF8 586 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 KCNN3Q9UGI6 736 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 PROCRQ9UNN8 238 aa14.47□□□□□ -0.09
CD28-203ENST00000458610 TMED7-TICAM2A0A0A6YYA0 188 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 A8MXE2 369 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 SULT2B1O00204 365 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 AP3D1O14617 1153 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 DNPH1O43598 174 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 SMNDC1O75940 238 aaKnown RBP eCLIP14.46□□□□□ -0.09
CD28-203ENST00000458610 CD8BP10966 210 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 ENPP1P22413 925 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 SHC1P29353 583 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 ACAA2P42765 397 aaKnown RBP14.46□□□□□ -0.09
CD28-203ENST00000458610 KIR2DL2P43627 348 aaPredicted RBP14.46□□□□□ -0.09
CD28-203ENST00000458610 KIR2DL3P43628 341 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 SORDQ00796 357 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 CAPRIN1Q14444 709 aaKnown RBP14.46□□□□□ -0.09
CD28-203ENST00000458610 ADRM1Q16186 407 aa14.46□□□□□ -0.09
CD28-203ENST00000458610 ZNF239Q16600 458 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms