RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SLAMF7Q9NQ25 335 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 VNN3Q9NY84 501 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 TREM2Q9NZC2 230 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 NDRG3Q9UGV2 375 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 RWDD2AQ9UIY3 292 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 OR52A1Q9UKL2 312 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 COPS3Q9UNS2 423 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 RCE1Q9Y256 329 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 TSSC4Q9Y5U2 329 aaPredicted RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 ALG6Q9Y672 507 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 AK9Q5TCS8 1911 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ANKRD26Q9UPS8 1709 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 VCANP13611 3396 aa4.96□□□□□ -1.61
VPS41-209ENST00000457055 ARFGEF2Q9Y6D5 1785 aa4.96□□□□□ -1.61
VPS41-209ENST00000457055 COL4A5P29400 1685 aa4.96□□□□□ -1.61
VPS41-209ENST00000457055 A0A087WWL8 130 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 LOC102723971A0A1B0GUV8 181 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 A0A1W2PPC1 479 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 TRABD2BA6NFA1 517 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 DUXAA6NLW8 204 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 SLC38A8A6NNN8 435 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 B5MCH6 92 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PPIAL4DF5H284 164 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 H3BNH8 94 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CDC7O00311 574 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 BHLHE40O14503 412 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CYB561D2O14569 222 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 RS1O15537 224 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 XRCC2O43543 280 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 TIMM8AO60220 97 aaPredicted RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 FADS1O60427 444 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PRKRAO75569 313 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 SLC25A12O75746 678 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 SULT1C4O75897 302 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 SOX30O94993 753 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 FAM107AO95990 144 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 EPOP01588 193 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ERBB2P04626 1255 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 HKR1P10072 659 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PIM1P11309 404 aaPredicted RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 CETPP11597 493 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ACP5P13686 325 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 GTF2F2P13984 249 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 SLC2A4P14672 509 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ZNF37AP17032 561 aaPredicted RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 UQCRC2P22695 453 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MMP11P24347 488 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 AZGP1P25311 298 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 ERP29P30040 261 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 CA5AP35218 305 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MPLP40238 635 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 GRIA3P42263 894 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PTGFRP43088 359 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 NPBWR2P48146 333 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 IDH3GP51553 393 aaPredicted RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 ART1P52961 327 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MLLT10P55197 1068 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 KCNK10P57789 538 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 VSX2P58304 361 aaPredicted RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 TAS2R39P59534 338 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ZP1P60852 638 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 NUTF2P61970 127 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 HERVK_113P63132 956 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 SHC2P98077 582 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MC2RQ01718 297 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CXCL9Q07325 125 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 AESQ08117 197 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 BST2Q10589 180 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 HYAL1Q12794 435 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 BNIP2Q12982 314 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 KEAP1Q14145 624 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 GRB14Q14449 540 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ELAVL3Q14576 367 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 KPNB1Q14974 876 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 TRIP10Q15642 601 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 KIF19Q2TAC6 998 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ESCO2Q56NI9 601 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 LRRC73Q5JTD7 316 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MARC1Q5VT66 337 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 C9orf135Q5VTT2 229 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 EMBQ6PCB8 327 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CBLN3Q6UW01 205 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ZDHHC24Q6UX98 284 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CYB5R4Q7L1T6 521 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 G2E3Q7L622 706 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 DPY19L4Q7Z388 723 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ADGRD2Q7Z7M1 963 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 LDB1Q86U70 411 aaPredicted RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 PIM3Q86V86 326 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CACUL1Q86Y37 369 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CALHM1Q8IU99 346 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 TMEM126BQ8IUX1 230 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ADGRF3Q8IZF5 1079 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 C1orf87Q8N0U7 546 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PGAM4Q8N0Y7 254 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 TMEM132CQ8N3T6 1108 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 HSD17B11Q8NBQ5 300 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 OR10W1Q8NGF6 305 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 OR9G4Q8NGQ1 327 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PIGXQ8TBF5 258 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms