RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SIGLEC6O43699 453 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 LCMT2O60294 686 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 KRT33AO76009 404 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 OR5F1O95221 314 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 VSIG10L2P0DP72 767 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF35P13682 527 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 CD53P19397 219 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 NT5EP21589 574 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ELAVL2Q12926 359 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 CAMK1Q14012 370 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 SPOUT1Q5T280 376 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ELP2Q6IA86 826 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 TMEM88Q6PEY1 159 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ZC3H14Q6PJT7 736 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF793Q6ZN11 406 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 C17orf64Q86WR6 236 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 NAXDQ8IW45 347 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 TEX19Q8NA77 164 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 SLC25A28Q96A46 364 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 PNPLA2Q96AD5 504 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 TRMT2BQ96GJ1 504 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 OR7D2Q96RA2 312 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 GFI1Q99684 422 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 PDCD1LG2Q9BQ51 273 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 UQCC2Q9BRT2 126 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 C1QTNF2Q9BXJ5 285 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ZDHHC5Q9C0B5 715 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 SLC25A18Q9H1K4 315 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 RHBGQ9H310 441 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF768Q9H5H4 540 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ESRP2Q9H6T0 727 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 WSB2Q9NYS7 404 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 MED11Q9P086 117 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 KLHL9Q9P2J3 617 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 PCYT1BQ9Y5K3 369 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 NUP210Q8TEM1 1887 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 MKI67P46013 3256 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 OR6C74A6NCV1 312 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 HMSDA8MTL9 139 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 GABARAPH6UMI1 98 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 SYT5O00445 386 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 NDUFS4O43181 175 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 OR1F1O43749 312 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 LILRB5O75023 590 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 STX11O75558 287 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ECDO95905 644 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 CTSLP07711 333 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 MAOBP27338 520 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 PTH2RP49190 550 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 GDI2P50395 445 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 PDX1P52945 283 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 GPR85P60893 370 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 RPS11P62280 158 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 FOXK2Q01167 660 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 MC2RQ01718 297 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 RIPPLY1Q0D2K3 151 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 UBXN2BQ14CS0 331 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 MLC1Q15049 377 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 WDR88Q6ZMY6 472 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF547Q8IVP9 402 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 MCATQ8IVS2 390 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF433Q8N7K0 673 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 BPIFCQ8NFQ6 507 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 STK35Q8TDR2 534 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 FCAMRQ8WWV6 532 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 ASB12Q8WXK4 309 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 CNRIP1Q96F85 164 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 NARS2Q96I59 477 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 LRIG1Q96JA1 1093 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 AICDAQ9GZX7 198 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 FKRPQ9H9S5 495 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 PLEKHA1Q9HB21 404 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 MRPL17Q9NRX2 175 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 POT1Q9NUX5 634 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 SIDT1Q9NXL6 827 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 LSM7Q9UK45 103 aaKnown RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 CENPVL1A0A0U1RR11 272 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 ANKRD20A5PA0PJZ0 165 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 UNC119BA6NIH7 251 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 MPTX1A8MV57 137 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 MAN2B1O00754 1011 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 GOSR2O14653 212 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 ELFN1P0C7U0 828 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 ACHEP22303 614 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 SSR2P43308 183 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 TAS2R43P59537 309 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 TAF1CQ15572 869 aaPredicted RBP9.53□□□□□ -0.88
CLIP4-208ENST00000456385 C9orf64Q5T6V5 341 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 LCTLQ6UWM7 567 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 BAIAP2L2Q6UXY1 529 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 GJD3Q8N144 294 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 PXT1Q8NFP0 134 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 VN1R2Q8NFZ6 395 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 OR51L1Q8NGJ5 315 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 OR10K1Q8NGX5 313 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 BRIX1Q8TDN6 353 aaKnown RBP9.53□□□□□ -0.88
CLIP4-208ENST00000456385 SETD7Q8WTS6 366 aaKnown RBP9.53□□□□□ -0.88
CLIP4-208ENST00000456385 KLHL31Q9H511 634 aa9.53□□□□□ -0.88
CLIP4-208ENST00000456385 GPN1Q9HCN4 374 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms