RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 A0A1W2PR48 441 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 BLOC1S5-TXNDC5H3BN57 136 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 ABLIM3O94929 683 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 SBK2P0C263 348 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 HIST1H1TP22492 207 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.353e-8■□□□□ 10.6
UBE2D3-210ENST00000453744 DCTDP32321 178 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 HTRA3P83110 453 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 GRM7Q14831 915 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 FAM74A1Q5RGS3 127 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 DPPA4Q7L190 304 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 TSEN15Q8WW01 171 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 TNFRSF13CQ96RJ3 184 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 KCNJ15Q99712 375 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 IL21Q9HBE4 155 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 ZSWIM8A7E2V4 1837 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 DISC1C4P0D8 188 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 OR10H2O60403 315 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 ITGA10O75578 1167 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 PAQR7Q86WK9 346 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 BRIX1Q8TDN6 353 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 TSNAXQ99598 290 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 ACTRT3Q9BYD9 372 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 SLC38A1Q9H2H9 487 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 HRASLSQ9HDD0 168 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 POMT2Q9UKY4 750 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 WDR90Q96KV7 1748 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 TOR1AO14656 332 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 TFPIP10646 304 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 CCR9P51686 369 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 EIPR1Q53HC9 387 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 EOGTQ5NDL2 527 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 CNOT9Q92600 299 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 ZNF443Q9Y2A4 671 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 PLEKHA6Q9Y2H5 1048 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 IER3IP1Q9Y5U9 82 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 OTOFQ9HC10 1997 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 S100A11P31949 105 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 SGCGQ13326 291 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 GK2Q14410 553 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 TRAM1Q15629 374 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ZNF627Q7L945 461 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 TCEAL8Q8IYN2 117 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 PTCHD1Q96NR3 888 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ENKD1Q9H0I2 346 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 C6orf106Q9H6K1 298 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 SRA1Q9HD15 236 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 CAMK2AQ9UQM7 478 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 IGLON5A6NGN9 336 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ECDO95905 644 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ATP1B1P05026 303 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 HPGDP15428 266 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 MFSD13AQ14CX5 517 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 OR1Q1Q15612 314 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 OR2L2Q8NH16 312 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ADAD1Q96M93 576 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 VN1R3Q9BXE9 311 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 C20orf141Q9NUB4 165 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ABRACLQ9P1F3 81 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ELOA3DA6NLF2 546 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 GABRA3P34903 492 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 SP3Q02447 781 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ZNF234Q14588 700 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ELOA3BQ3SY89 546 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 MRPL2Q5T653 305 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 GSG1LQ6UXU4 331 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ARIH2OSQ8N7S6 290 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 ELOA3Q8NG57 546 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 DUSP19Q8WTR2 217 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 LCN9Q8WX39 176 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 DVL3Q92997 716 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 NKX3-1Q99801 234 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 IL20Q9NYY1 176 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 NOP16Q9Y3C1 178 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 SPACA6W5XKT8 324 aa12.86□□□□□ -0.35
UBE2D3-210ENST00000453744 HLA-DQB1P01920 261 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 ADH1AP07327 375 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 SLC6A6P31641 620 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 RAB12Q6IQ22 244 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 OR5M1Q8NGP8 315 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 LRIG1Q96JA1 1093 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 LYARQ9NX58 379 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 DEC1Q9P2X7 70 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 PLCL2Q9UPR0 1127 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 MRPS23Q9Y3D9 190 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 TET1Q8NFU7 2136 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 TRAV18A0A075B6X5 111 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 KANTRA0A1W2PQU2 76 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 C7orf66A4D0T2 115 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 SLC31A1O15431 190 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 EPXP11678 715 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 ART1P52961 327 aa12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 PCBP4P57723 403 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-210ENST00000453744 RAP2BP61225 183 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms