RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 GMPPAQ96IJ6 420 aaPredicted RBP14.39□□□□□ -0.11
SCAMP4-205ENST00000452128 RBM24Q9BX46 236 aaKnown RBP14.39□□□□□ -0.11
SCAMP4-205ENST00000452128 RAD21L1Q9H4I0 556 aa14.39□□□□□ -0.11
SCAMP4-205ENST00000452128 TMEM38AQ9H6F2 299 aa14.39□□□□□ -0.11
SCAMP4-205ENST00000452128 SAR1AQ9NR31 198 aa14.39□□□□□ -0.11
SCAMP4-205ENST00000452128 CTPS2Q9NRF8 586 aa14.39□□□□□ -0.11
SCAMP4-205ENST00000452128 A0A1W2PNR3 127 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 GJE1A6NN92 205 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 EEF1E1-BLOC1S5C9J1V9 151 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 EEF1E1O43324 174 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 GCM2O75603 506 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 CTAG2O75638 210 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 IL7RP16871 459 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 ENPP1P22413 925 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 PPIBP23284 216 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 RYKP34925 604 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 KIR2DL3P43628 341 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 IDH2P48735 452 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 GZMMP51124 257 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 CCR4P51679 360 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 FAM27E3Q08E93 113 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 PDSS1Q5T2R2 415 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 ZNF836Q6ZNA1 936 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 TMPPEQ6ZT21 453 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 LUZP2Q86TE4 346 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 COMTD1Q86VU5 262 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 PTOV1Q86YD1 416 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 ZNF610Q8N9Z0 462 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 ANKRD27Q96NW4 1050 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 CGREF1Q99674 301 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 SPATA9Q9BWV2 254 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 OPN3Q9H1Y3 402 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 GP6Q9HCN6 339 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 GLRX2Q9NS18 164 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 LEF1Q9UJU2 399 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 OSGIN1Q9UJX0 560 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 ZNF443Q9Y2A4 671 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 NDUFAF1Q9Y375 327 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 AKAP6Q13023 2319 aa14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 HRNRQ86YZ3 2850 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-205ENST00000452128 CFAP73A6NFT4 308 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 EPXP11678 715 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 PRG2P13727 222 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 ETS2P15036 469 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 SLC1A3P43003 542 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 SELPLGQ14242 412 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 ZSWIM7Q19AV6 140 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 LIN52Q52LA3 116 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 C3orf33Q6P1S2 294 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 C22orf34Q6ZV56 151 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 NET1Q7Z628 596 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 KIF18BQ86Y91 864 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 ZNF440Q8IYI8 595 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 CNEP1R1Q8N9A8 125 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 OR6K3Q8NGY3 331 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 LINC01560Q8TB33 94 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 ABHD3Q8WU67 409 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 SLC35B4Q969S0 331 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 CPNE4Q96A23 557 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 ARL5BQ96KC2 179 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 CHRNA9Q9UGM1 479 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 MCTS1Q9ULC4 181 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 CLEC4AQ9UMR7 237 aa14.37□□□□□ -0.11
SCAMP4-205ENST00000452128 FXYD1O00168 92 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 SMAD9O15198 467 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 SYNGR4O95473 234 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 VIMP08670 466 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 PABPC4LP0CB38 370 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 GKN3PP0CG01 181 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 TROVE2P10155 538 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 FKBP2P26885 142 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 AGTR1P30556 359 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 CCKARP32238 428 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 CLK1P49759 484 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 ARFIP2P53365 341 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 PCBP3P57721 371 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 SIRPAP78324 504 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 H3F3AP84243 136 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 CDK6Q00534 326 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 KLF10Q13118 480 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 GNA13Q14344 377 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 HSP90B2PQ58FF3 399 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 SYT14P1Q58G82 188 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 GCNT6Q5T4J0 391 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 ATP6V1C2Q8NEY4 427 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 BBS10Q8TAM1 723 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 SLC25A43Q8WUT9 341 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 C10orf82Q8WW14 230 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 ZNF559Q9BR84 538 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 KAT8Q9H7Z6 458 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 BCO1Q9HAY6 547 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 TIGARQ9NQ88 270 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 ELOVL5Q9NYP7 299 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 KLHL14Q9P2G3 628 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 IFT52Q9Y366 437 aa14.36□□□□□ -0.11
SCAMP4-205ENST00000452128 ZNF208O43345 1280 aa14.35□□□□□ -0.11
SCAMP4-205ENST00000452128 TPST1O60507 370 aa14.35□□□□□ -0.11
SCAMP4-205ENST00000452128 CYTIPO60759 359 aa14.35□□□□□ -0.11
SCAMP4-205ENST00000452128 TACR3P29371 465 aa14.35□□□□□ -0.11
SCAMP4-205ENST00000452128 ADSLP30566 484 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms