RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PNMTP11086 282 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 FPR1P21462 350 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 FOXF1Q12946 379 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 PPP1R8Q12972 351 aaKnown RBP12.74□□□□□ -0.37
SHMT2-203ENST00000449049 EXOC3L2Q2M3D2 409 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 TMEM44Q2T9K0 475 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 GLYR1Q49A26 553 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-203ENST00000449049 SHQ1Q6PI26 577 aaKnown RBP12.74□□□□□ -0.37
SHMT2-203ENST00000449049 TMEM179BQ7Z7N9 219 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 NKAIN4Q8IVV8 208 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 FAM98AQ8NCA5 519 aaKnown RBP12.74□□□□□ -0.37
SHMT2-203ENST00000449049 OR5K1Q8NHB7 308 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 POC1BQ8TC44 478 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 SLC7A13Q8TCU3 470 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 SLC39A7Q92504 469 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 NRBF2Q96F24 287 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 ALPK1Q96QP1 1244 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 NPAS1Q99742 590 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 OR2B2Q9GZK3 357 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 OSGIN1Q9UJX0 560 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 DKKL1Q9UK85 242 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 NINQ8N4C6 2090 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 LOC400499M0QZD8 3231 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 A0A087WUJ7 227 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 ZIC3O60481 467 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 E2F6O75461 281 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 HK1P19367 917 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 ADH6P28332 368 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 POLR2HP52434 150 aaKnown RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 FGD3Q5JSP0 725 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 DCST1Q5T197 706 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 EPHX4Q8IUS5 362 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 QPCTLQ9NXS2 382 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 B3GNT3Q9Y2A9 372 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 PCNX3Q9H6A9 2034 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 HPNP05981 417 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 ZNF17P17021 662 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 GDF1P27539 372 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 RFC3P40938 356 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 APOBEC1P41238 236 aaKnown RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 EIF1P41567 113 aaKnown RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 RBM34P42696 430 aaKnown RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 SEC23BQ15437 767 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 RPUSD3Q6P087 351 aaKnown RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 PODNL1Q6PEZ8 512 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 GTPBP8Q8N3Z3 284 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 SVOPLQ8N434 492 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 TMEM251Q8N6I4 163 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 ICA1LQ8NDH6 482 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 TMEM255BQ8WV15 326 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 ACOT11Q8WXI4 607 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-203ENST00000449049 OAZ3Q9UMX2 235 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 LRRC42Q9Y546 428 aa12.73□□□□□ -0.37
SHMT2-203ENST00000449049 NCKAP5O14513 1909 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 A0A087WUU8 490 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 SH3PXD2BA1X283 911 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 ELOA3DA6NLF2 546 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-203ENST00000449049 ACOT7O00154 380 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 ZNF23P17027 643 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 MERTKQ12866 999 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 MICAQ29983 383 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 ELOA3BQ3SY89 546 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 ADGRG3Q86Y34 549 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 HIPK1Q86Z02 1210 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-203ENST00000449049 ELOA3Q8NG57 546 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 TMEM239Q8WW34 195 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 HS6ST2Q96MM7 605 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 BARD1Q99728 777 aaKnown RBP12.72□□□□□ -0.37
SHMT2-203ENST00000449049 PSD2Q9BQI7 771 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 TMCC3Q9ULS5 477 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 LHX6Q9UPM6 363 aa12.72□□□□□ -0.37
SHMT2-203ENST00000449049 TMED7-TICAM2A0A0A6YYA0 188 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 ARRDC5A6NEK1 342 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 SAC3D1A6NKF1 404 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 SHISA8B8ZZ34 492 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 G3V2T6 193 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 MAGEA5P43359 124 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 ARHGDIAP52565 204 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 B3GALT5-AS1P59052 145 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 PMP22Q01453 160 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 FOXD4Q12950 439 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-203ENST00000449049 LAPTM4AQ15012 233 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 TRIP10Q15642 601 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 INAQ16352 499 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 SLC6A19Q695T7 634 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 FAM109AQ8N4B1 249 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 TMEM43Q9BTV4 400 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 CNTNAP3Q9BZ76 1288 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 GABARAPL1Q9H0R8 117 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 TMED7Q9Y3B3 224 aa12.71□□□□□ -0.37
SHMT2-203ENST00000449049 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 FAM166BA8MTA8 275 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 CCNB2O95067 398 aa12.71□□□□□ -0.38
SHMT2-203ENST00000449049 RASAL1O95294 804 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms