RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CCDC124Q96CT7 223 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 ZG16BQ96DA0 208 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 C18orf12Q96KH6 178 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 G6PC3Q9BUM1 346 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 RSPO3Q9BXY4 272 aaPredicted RBP12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 ZNF350Q9GZX5 532 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 PCDHAC1Q9H158 963 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 TMEM38AQ9H6F2 299 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 SDHAF3Q9NRP4 125 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 KCNE5Q9UJ90 142 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 DKKL1Q9UK85 242 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 FBXL2Q9UKC9 423 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 PCNX3Q9H6A9 2034 aa12.38□□□□□ -0.43
PDLIM2-213ENST00000448520 ELOVL7A1L3X0 281 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 FAM171A2A8MVW0 826 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 LINC01387J3KSC0 135 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 HCRTR2O43614 444 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 PGM3O95394 542 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 AGR2O95994 175 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 OPN1SWP03999 348 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 HSD17B1P14061 328 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 DPP4P27487 766 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 MAGEA8P43361 318 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 RASSF2P50749 326 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 CRYBA2P53672 197 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 DSCR4P56555 118 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 NKX6-1P78426 367 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 MS4A2Q01362 244 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 P4HA3Q7Z4N8 544 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 OR4C3Q8NH37 302 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 RNF138Q8WVD3 245 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 FIG4Q92562 907 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 PIGTQ969N2 578 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 TRNT1Q96Q11 434 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 PIP5K1AQ99755 562 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 RTN4RQ9BZR6 473 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 ZNF226Q9NYT6 803 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 LIPT1Q9Y234 373 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 WDR45Q9Y484 360 aa12.37□□□□□ -0.43
PDLIM2-213ENST00000448520 ROS1P08922 2347 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 A0A1W2PNV4 684 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 C5orf58C9J3I9 102 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 CXCR6O00574 342 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 GSTA4O15217 222 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 RRP9O43818 475 aaKnown RBP12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 STX11O75558 287 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 TNFSF13O75888 250 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 UTS2O95399 124 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 TGM6O95932 706 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 INHBBP09529 407 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 GGT1P19440 569 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ATP6V1B2P21281 511 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ATP6V1C1P21283 382 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ERFP50548 548 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 CRISP3P54108 245 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 GAS1P54826 345 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 TXNL4AP83876 142 aaKnown RBP12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 HPCAP84074 193 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 LTBQ06643 244 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 POU4F3Q15319 338 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 MAPK14Q16539 360 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 OR5M10Q6IEU7 315 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 REEP3Q6NUK4 255 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ERICH5Q6P6B1 374 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 APOOLQ6UXV4 268 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 LRRC74BQ6ZQY2 392 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 LSRQ86X29 649 aaPredicted RBP12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 GCNT2Q8N0V5 402 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 MEIOBQ8N635 442 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 GATSQ8NAP1 163 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 HIPK4Q8NE63 616 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 OR4K17Q8NGC6 315 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 MCUR1Q96AQ8 359 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 STARD4Q96DR4 205 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ARSGQ96EG1 525 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 SPATA9Q9BWV2 254 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ELOVL5Q9NYP7 299 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 ANGPT4Q9Y264 503 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 AP3M1Q9Y2T2 418 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 DSCAMO60469 2012 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 DSPPQ9NZW4 1301 aa12.36□□□□□ -0.43
PDLIM2-213ENST00000448520 CLDN24A6NM45 220 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 NPIPB9F8W1W9 429 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 ARPC2O15144 300 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 SCO2O43819 266 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 KIAA0513O60268 411 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 BCAS1O75363 584 aaPredicted RBP12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 UGT2B17O75795 530 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 AK1P00568 194 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 ME2P23368 584 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 PCBP3P57721 371 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 FAM27E3Q08E93 113 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 RBBP4Q09028 425 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 FGFBP1Q14512 234 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms