RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PLPPR5Q32ZL2 321 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 FAM98BQ52LJ0 330 aaKnown RBP15.58■□□□□ 0.08
LIME1-202ENST00000444951 CANT1Q8WVQ1 401 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 DTNBP1Q96EV8 351 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 ZNF559Q9BR84 538 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 SLC6A15Q9H2J7 730 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 LDAHQ9H6V9 325 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 TMEM27Q9HBJ8 222 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 TESQ9UGI8 421 aaKnown RBP15.58■□□□□ 0.08
LIME1-202ENST00000444951 SLC6A5Q9Y345 797 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 LIPGQ9Y5X9 500 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 AKAP9Q99996 3911 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 ABCA12Q86UK0 2595 aa15.58■□□□□ 0.08
LIME1-202ENST00000444951 A0A087WZY1 265 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 J3KTA2 159 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 DIRAS1O95057 198 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 PRKCAP17252 672 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 PSMA4P25789 261 aaKnown RBP15.57■□□□□ 0.08
LIME1-202ENST00000444951 MST1P26927 711 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 TAS2R41P59536 307 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 VLDLRP98155 873 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 MERTKQ12866 999 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 GANABQ14697 944 aaKnown RBP15.57■□□□□ 0.08
LIME1-202ENST00000444951 OR1Q1Q15612 314 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 HYAL4Q2M3T9 481 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 CMPK2Q5EBM0 449 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 ENTPD8Q5MY95 495 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 WBP2NLQ6ICG8 309 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 ZDHHC21Q8IVQ6 265 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 ADGRG5Q8IZF4 528 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 ATP6V1C2Q8NEY4 427 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 TMEM234Q8WY98 164 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 SLC35B4Q969S0 331 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 TRIM2Q9C040 744 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 OR2B2Q9GZK3 357 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 DENND2DQ9H6A0 471 aaPredicted RBP15.57■□□□□ 0.08
LIME1-202ENST00000444951 EVA1AQ9H8M9 152 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 RHCGQ9UBD6 479 aa15.57■□□□□ 0.08
LIME1-202ENST00000444951 PCNX3Q9H6A9 2034 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 A0A1B0GWA3 101 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 TCRBV3S1A0A5B6 114 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 OPN1LWP04000 364 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 SEMG1P04279 462 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 FABP3P05413 133 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 HPNP05981 417 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 STSP08842 583 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 PTNP21246 168 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 PIN1Q13526 163 aaPredicted RBP15.56■□□□□ 0.08
LIME1-202ENST00000444951 C1QL3Q5VWW1 255 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 FJX1Q86VR8 437 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 TSPYL5Q86VY4 417 aaPredicted RBP15.56■□□□□ 0.08
LIME1-202ENST00000444951 POC1BQ8TC44 478 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 ST8SIA1Q92185 356 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 ZBTB8AQ96BR9 441 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 SFXN2Q96NB2 322 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 ACER3Q9NUN7 267 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 SELENONQ9NZV5 590 aa15.56■□□□□ 0.08
LIME1-202ENST00000444951 FAM32AQ9Y421 112 aaKnown RBP15.56■□□□□ 0.08
LIME1-202ENST00000444951 HEATR5AQ86XA9 2040 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 TRGV5A0A0B4J1U4 118 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 OR2M5A3KFT3 312 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 H3BML4 177 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 ZNHIT1O43257 154 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 GPIP06744 558 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 UMPSP11172 480 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 TACR3P29371 465 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 SLC1A3P43003 542 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 ACTR3P61158 418 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 HSF1Q00613 529 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 CYP4Z1Q86W10 505 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 SIAH3Q8IW03 269 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 ADAMTS16Q8TE57 1224 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 SMPDL3BQ92485 455 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 C7orf34Q96L11 122 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 PIGQQ9BRB3 760 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 TMEM185BQ9H7F4 350 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 ZDHHC11Q9H8X9 412 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 QPCTLQ9NXS2 382 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 NDUFAF4Q9P032 175 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 TNFRSF10DQ9UBN6 386 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 ENPP4Q9Y6X5 453 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 FBN2P35556 2912 aa15.55■□□□□ 0.08
LIME1-202ENST00000444951 FAAHO00519 579 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 FMO6PO60774 539 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 ENTPD5O75356 428 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 RAP2AP10114 183 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 PEPDP12955 493 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 PRF1P14222 555 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 IL11P20809 199 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 CXCR1P25024 350 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 GCKP35557 465 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 STARP49675 285 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 POLR2HP52434 150 aaKnown RBP15.54■□□□□ 0.08
LIME1-202ENST00000444951 CDH12P55289 794 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 ALG10BQ5I7T1 473 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 GRINAQ7Z429 371 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 TSEN54Q7Z6J9 526 aaKnown RBP15.54■□□□□ 0.08
LIME1-202ENST00000444951 GTPBP8Q8N3Z3 284 aaPredicted RBP15.54■□□□□ 0.08
LIME1-202ENST00000444951 NR4A3Q92570 626 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms