RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TPTEP56180 551 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 ERVK-25P63136 954 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 NKG7Q16617 165 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 PRSS41Q7RTY9 318 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 DNAJC22Q8N4W6 341 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 THRSPQ92748 146 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 UCN3Q969E3 161 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 CNN2Q99439 309 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 FBXL4Q9UKA2 621 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 CDH10Q9Y6N8 788 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 A0A1W2PQ72 361 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 ZNF879B4DU55 563 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 H3BSH0 61 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 UPK1AO00322 258 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 ATE1O95260 518 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 SLC10A1Q14973 349 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 CAMKMTQ7Z624 323 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 CYB561A3Q8NBI2 242 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 NRTNQ99748 197 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 FAM117AQ9C073 453 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 EIF1BO60739 113 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 CSTBP04080 98 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 GP1BAP07359 652 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 P2RX1P51575 399 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 SLC6A19Q695T7 634 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 ZNF793Q6ZN11 406 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 LANCL3Q6ZV70 420 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 AAED1Q7RTV5 226 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 IGFN1Q86VF2 1251 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 ULBP2Q9BZM5 246 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 DEFB127Q9H1M4 99 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 CHMP1AQ9HD42 196 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 TRAV17A0A0B4J275 112 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 KCNK2O95069 426 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 HCKP08631 526 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 NR4A1P22736 598 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 S100GP29377 79 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 RIDAP52758 137 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 YRDCQ86U90 279 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 ZBTB46Q86UZ6 589 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 IQCF1Q8N6M8 205 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 CT55Q8WUE5 264 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 SLC25A43Q8WUT9 341 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 NKD1Q969G9 470 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 ZNF775Q96BV0 537 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 GAL3ST1Q99999 423 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 GPR87Q9BY21 358 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 ASB4Q9Y574 426 aa13.02□□□□□ -0.32
SMARCA4-204ENST00000444061 APC2O95996 2303 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 UBE2QL1A1L167 161 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 A6NHS1 94 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 CENPBD1B2RD01 187 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 CD82P27701 267 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 PNLIPRP2P54317 469 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 SIRPAP78324 504 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 LSAMPQ13449 338 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 ARHGAP11BQ3KRB8 267 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 DDI2Q5TDH0 399 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 HBMQ6B0K9 141 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 GPR139Q6DWJ6 353 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 FTMTQ8N4E7 242 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 ACBD7Q8N6N7 88 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 TMEM102Q8N9M5 508 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 OR51L1Q8NGJ5 315 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 OR52D1Q9H346 318 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 COQ3Q9NZJ6 369 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 USP22Q9UPT9 525 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 WIF1Q9Y5W5 379 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 GPR171O14626 319 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 IGHG1P01857 330 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 C1QAP02745 245 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 ENPP1P22413 925 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 GRPRP30550 384 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 ASRGL1Q7L266 308 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 GRINAQ7Z429 371 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 RNF113BQ8IZP6 322 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 TMEM203Q969S6 136 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 SARAFQ96BY9 339 aa13.02□□□□□ -0.33
SMARCA4-204ENST00000444061 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 ITGA5P08648 1049 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 PPIAP62937 165 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 GLO1Q04760 184 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 SHFQ7M4L6 423 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 MARCH9Q86YJ5 346 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 OR5W2Q8NH69 310 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 MUCL1Q96DR8 90 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 NUDT9Q9BW91 350 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 WWTR1Q9GZV5 400 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 GPR52Q9Y2T5 361 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 SLC6A5Q9Y345 797 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 CORINQ9Y5Q5 1042 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 TRAV27A0A087WT01 109 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 LNP1A1A4G5 178 aa13.01□□□□□ -0.33
SMARCA4-204ENST00000444061 PRKNO60260 465 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms