RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 GSTA1P08263 222 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 SNRPAP09012 282 aaKnown RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 TFPIP10646 304 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 UBL4AP11441 157 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 APEX1P27695 318 aaKnown RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 FOXA1P55317 472 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 SCGB2A2Q13296 93 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 LASP1Q14847 261 aaKnown RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 ABLIM2Q6H8Q1 611 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 KLHL24Q6TFL4 600 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 SPATA19Q7Z5L4 167 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 LCA5Q86VQ0 697 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 CCNYL1Q8N7R7 359 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 C1orf162Q8NEQ5 155 aaPredicted RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 ADAMTS15Q8TE58 950 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 TMEM234Q8WY98 164 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 KCNS3Q9BQ31 491 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 FUT8Q9BYC5 575 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 QRSL1Q9H0R6 528 aaKnown RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 PARPBPQ9NWS1 579 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 DCTN4Q9UJW0 460 aa12.98□□□□□ -0.33
MRPL40-202ENST00000443660 FBXO9Q9UK97 447 aaPredicted RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 FAF1Q9UNN5 650 aaPredicted RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 SPIN1Q9Y657 262 aaPredicted RBP12.98□□□□□ -0.33
MRPL40-202ENST00000443660 ZNF716A6NP11 495 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 ETV2O00321 342 aaPredicted RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 STAMBPO95630 424 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 ITGA5P08648 1049 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 DDX5P17844 614 aaKnown RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 FRKP42685 505 aaPredicted RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 MAGEA8P43361 318 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 COMPP49747 757 aaPredicted RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 FOXG1P55316 489 aaPredicted RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 MERTKQ12866 999 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 ZNF385BQ569K4 471 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 SYT14P1Q58G82 188 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 EXOSC6Q5RKV6 272 aaKnown RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 DCST2Q5T1A1 773 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 C9orf135Q5VTT2 229 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 OR52E4Q8NGH9 312 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 DCAKDQ8WVC6 231 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 ST8SIA1Q92185 356 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 ZNF524Q96C55 264 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 FAM120BQ96EK7 910 aaKnown RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 THUMPD3Q9BV44 507 aaKnown RBP12.97□□□□□ -0.33
MRPL40-202ENST00000443660 ACTRT3Q9BYD9 372 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 TENM1Q9UKZ4 2725 aa12.97□□□□□ -0.33
MRPL40-202ENST00000443660 VSTM5A8MXK1 200 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 KRT16P08779 473 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 TACSTD2P09758 323 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 DAOP14920 347 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 GIFP27352 417 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 SESN3P58005 492 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 KIAA0040Q15053 153 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 CASP12Q6UXS9 341 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 RINLQ6ZS11 566 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 ZNF418Q8TF45 676 aaPredicted RBP12.96□□□□□ -0.33
MRPL40-202ENST00000443660 CCDC126Q96EE4 140 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 CCT7Q99832 543 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 TSPYL1Q9H0U9 437 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 GSTO2Q9H4Y5 243 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 METTL17Q9H7H0 456 aaPredicted RBP12.96□□□□□ -0.33
MRPL40-202ENST00000443660 ZDHHC18Q9NUE0 388 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 C1orf109Q9NX04 203 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 PCDHB14Q9Y5E9 798 aa12.96□□□□□ -0.33
MRPL40-202ENST00000443660 PLCE1Q9P212 2302 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 SERINC4A6NH21 518 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 ESPNB1AK53 854 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 SLC28A1O00337 649 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 DNPH1O43598 174 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 CRYAAP02489 173 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 CREB1P16220 341 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 PGCP20142 388 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 EFNA1P20827 205 aaPredicted RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 FKBP2P26885 142 aaKnown RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 NTF4P34130 210 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 APOBEC1P41238 236 aaKnown RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 CCT3P49368 545 aaKnown RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 IDH3GP51553 393 aaPredicted RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 SLC16A1P53985 500 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 DVL1P1P54792 670 aaPredicted RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 CDH15P55291 814 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 NAA20P61599 178 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 SLC7A5Q01650 507 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 ZSWIM7Q19AV6 140 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 R3HCC1LQ7Z5L2 792 aaKnown RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 RELL1Q8IUW5 271 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 NEU4Q8WWR8 484 aaPredicted RBP12.95□□□□□ -0.34
MRPL40-202ENST00000443660 MTERF3Q96E29 417 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 TSSK3Q96PN8 268 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 SNX18Q96RF0 628 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 LAT2Q9GZY6 243 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 CA10Q9NS85 328 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 ACER3Q9NUN7 267 aa12.95□□□□□ -0.34
MRPL40-202ENST00000443660 TMEM89A2RUT3 159 aa12.94□□□□□ -0.34
MRPL40-202ENST00000443660 NPIPB8E9PQR5 432 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms