RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 KCTD14Q9BQ13 255 aaPredicted RBP14.42□□□□□ -0.1
USP39-205ENST00000442708 ADAM19Q9H013 955 aa14.42□□□□□ -0.1
USP39-205ENST00000442708 ARMC7Q9H6L4 198 aa14.42□□□□□ -0.1
USP39-205ENST00000442708 DOCK7Q96N67 2140 aa14.42□□□□□ -0.1
USP39-205ENST00000442708 MED12LQ86YW9 2145 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 LRRK2Q5S007 2527 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 WIPF3A6NGB9 483 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 CLCA1A8K7I4 914 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 CXCR6O00574 342 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 ZG16O60844 167 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 TOXO94900 526 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 AGFG2O95081 481 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 GABRA1P14867 456 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 TNFRSF1BP20333 461 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 TACR3P29371 465 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 SFTPDP35247 375 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 MSX2P35548 267 aaPredicted RBP14.41□□□□□ -0.1
USP39-205ENST00000442708 SLC1A3P43003 542 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 MNAT1P51948 309 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 PMPCAQ10713 525 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 LRRC23Q53EV4 343 aaPredicted RBP14.41□□□□□ -0.1
USP39-205ENST00000442708 NSUN5P2Q63ZY6 315 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 C16orf89Q6UX73 402 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 B3GNT6Q6ZMB0 384 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 GRINAQ7Z429 371 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 CADM2Q8N3J6 435 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 FIG4Q92562 907 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 SLC35B4Q969S0 331 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 ZNF845Q96IR2 970 aaPredicted RBP14.41□□□□□ -0.1
USP39-205ENST00000442708 TRIB1Q96RU8 372 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 TAS2R1Q9NYW7 299 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 CLCF1Q9UBD9 225 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 EGFL7Q9UHF1 273 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 OSGIN1Q9UJX0 560 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 MPDZO75970 2070 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 COL12A1Q99715 3063 aa14.41□□□□□ -0.1
USP39-205ENST00000442708 TMED7-TICAM2A0A0A6YYA0 188 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 SYT5O00445 386 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 EIF1AYO14602 144 aaKnown RBP14.4□□□□□ -0.1
USP39-205ENST00000442708 TNFSF11O14788 317 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 ADAMDEC1O15204 470 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 FESP07332 822 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 C8BP07358 591 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 HOXD4P09016 255 aaPredicted RBP14.4□□□□□ -0.1
USP39-205ENST00000442708 HSD17B1P14061 328 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 GGT1P19440 569 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 TCN1P20061 433 aaPredicted RBP14.4□□□□□ -0.1
USP39-205ENST00000442708 CCNA2P20248 432 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 HTR1EP28566 365 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 SELENBP1Q13228 472 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 CDSNQ15517 529 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 TMEM176BQ3YBM2 270 aaPredicted RBP14.4□□□□□ -0.1
USP39-205ENST00000442708 CYBRD1Q53TN4 286 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 WBP2NLQ6ICG8 309 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 TSPYL5Q86VY4 417 aaPredicted RBP14.4□□□□□ -0.1
USP39-205ENST00000442708 MEIOBQ8N635 442 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 C9orf106Q8NAJ2 232 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 BHLHE22Q8NFJ8 381 aaPredicted RBP14.4□□□□□ -0.1
USP39-205ENST00000442708 OR6T1Q8NGN1 323 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 SLC26A7Q8TE54 656 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 PHF10Q8WUB8 498 aaKnown RBP14.4□□□□□ -0.1
USP39-205ENST00000442708 C3orf49Q96BT1 292 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 COQ10BQ9H8M1 238 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 TMED7Q9Y3B3 224 aa14.4□□□□□ -0.1
USP39-205ENST00000442708 A0A1W2PNR3 127 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 TMEM72A0PK05 275 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 GSTA4O15217 222 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 TGM6O95932 706 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 ME2P23368 584 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 PTGER4P35408 488 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 APOBEC1P41238 236 aaKnown RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 POLR2HP52434 150 aaKnown RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 RGS8P57771 180 aaPredicted RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 BNIP2Q12982 314 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 FXNQ16595 210 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 SAMD4BQ5PRF9 694 aaKnown RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 C3orf33Q6P1S2 294 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 C6orf89Q6UWU4 347 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 LURAP1LQ8IV03 231 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 CCDC71Q8IV32 467 aaPredicted RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 NAXEQ8NCW5 288 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 TNIP2Q8NFZ5 429 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 OR10D3Q8NH80 312 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 VANGL1Q8TAA9 524 aaPredicted RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 ITLN2Q8WWU7 325 aaPredicted RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 SLC7A6OSQ96CW6 309 aaPredicted RBP14.39□□□□□ -0.11
USP39-205ENST00000442708 DNAJA3Q96EY1 480 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 KLHL15Q96M94 604 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 UCN2Q96RP3 112 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 SRXN1Q9BYN0 137 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 OR11A1Q9GZK7 315 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 CALHM2Q9HA72 323 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 CHRNA9Q9UGM1 479 aa14.39□□□□□ -0.11
USP39-205ENST00000442708 A0A0G2JNJ9 132 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 A0A1B0GWA3 101 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 ZC3H12DA2A288 527 aaKnown RBP14.38□□□□□ -0.11
USP39-205ENST00000442708 MBD3L4A6NDZ8 208 aaPredicted RBP14.38□□□□□ -0.11
USP39-205ENST00000442708 MBD3L3A6NE82 208 aaPredicted RBP14.38□□□□□ -0.11
USP39-205ENST00000442708 MBD3L5A6NJ08 208 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms