RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DUSP18Q8NEJ0 188 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM255BQ8WV15 326 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 B3GAT2Q9NPZ5 323 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 EIF3KQ9UBQ5 218 aaKnown RBP13.08□□□□□ -0.32
LIMD1-202ENST00000440097 TEX51A0A1B0GUA7 166 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 LYRM1O43325 122 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 NSA2O95478 260 aaKnown RBP13.08□□□□□ -0.32
LIMD1-202ENST00000440097 CBX7O95931 251 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 PRG2P13727 222 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 GSTM3P21266 225 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 MGAT2Q10469 447 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 PXDC1Q5TGL8 231 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 CNIH2Q6PI25 160 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 OR8J1Q8NGP2 316 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 NR4A3Q92570 626 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 STACQ99469 402 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 KATNB1Q9BVA0 655 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 UCK1Q9HA47 277 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 C12orf10Q9HB07 376 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 PCDH15Q96QU1 1955 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 PDGFAP04085 211 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 GIPRP48546 466 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 FNTBP49356 437 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 FAM53BQ14153 422 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 TCTE1Q5JU00 501 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 ZCCHC12Q6PEW1 402 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 GDF7Q7Z4P5 450 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 SLC37A3Q8NCC5 494 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 OR51Q1Q8NH59 317 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 C1orf216Q8TAB5 229 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 NACC2Q96BF6 587 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 KCTD7Q96MP8 289 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 DCLRE1CQ96SD1 692 aaKnown RBP13.07□□□□□ -0.32
LIMD1-202ENST00000440097 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
LIMD1-202ENST00000440097 PLA2G12AQ9BZM1 189 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 NUP50Q9UKX7 468 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 RPL36Q9Y3U8 105 aaKnown RBP13.07□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM150CB9EJG8 249 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 CTNSO60931 367 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 HLA-DQB1P01920 261 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 NID1P14543 1247 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 DHPSP49366 369 aaPredicted RBP13.07□□□□□ -0.32
LIMD1-202ENST00000440097 SMSP52788 366 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 ZP2Q05996 745 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 GRM7Q14831 915 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 MINDY4Q4G0A6 757 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 ZNF595Q8IYB9 648 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 ARHGEF39Q8N4T4 335 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 OR4N2Q8NGD1 307 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 OR6C4Q8NGE1 309 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 GNPDA2Q8TDQ7 276 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 DNAJA4Q8WW22 397 aaPredicted RBP13.07□□□□□ -0.32
LIMD1-202ENST00000440097 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
LIMD1-202ENST00000440097 CTHRC1Q96CG8 243 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 ERVK-19Q9WJR5 959 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 OR10H1Q9Y4A9 318 aa13.07□□□□□ -0.32
LIMD1-202ENST00000440097 SPIN1Q9Y657 262 aaPredicted RBP13.07□□□□□ -0.32
LIMD1-202ENST00000440097 TGFBR3LH3BV60 316 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 ORC5O43913 435 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 PRKYO43930 277 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 HPGDSO60760 199 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 CH25HO95992 272 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 TP53P04637 393 aaPredicted RBP13.06□□□□□ -0.32
LIMD1-202ENST00000440097 THBS1P07996 1170 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 OR1D4P47884 311 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
LIMD1-202ENST00000440097 EEF1A1P68104 462 aaKnown RBP13.06□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM201Q5SNT2 666 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 FAAH2Q6GMR7 532 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 ACSM5Q6NUN0 579 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 ZAR1Q86SH2 424 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 C1GALT1C1Q96EU7 318 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 LRR1Q96L50 414 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 MARVELD1Q9BSK0 173 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 PPP1R3EQ9H7J1 279 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 GPR52Q9Y2T5 361 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM184BQ9Y519 407 aaPredicted RBP13.06□□□□□ -0.32
LIMD1-202ENST00000440097 PIP5K1CO60331 668 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 SLC43A1O75387 559 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 SLC22A5O76082 557 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 OR7A10O76100 309 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 AK1P00568 194 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 CPEP16870 476 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 CD1CP29017 333 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 ETV5P41161 510 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 ETV1P50549 477 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 IL18Q14116 193 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 C12orf73Q69YU5 71 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 SLC27A4Q6P1M0 643 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 GRHL3Q8TE85 626 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 AP3S1Q92572 193 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 AKAP1Q92667 903 aaKnown RBP eCLIP13.06□□□□□ -0.32
LIMD1-202ENST00000440097 OTULINQ96BN8 352 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 FOLH1BQ9HBA9 442 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms