RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PTHP01270 115 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TP53P04637 393 aaPredicted RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 HMGN1P05114 100 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 NR2F1P10589 423 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ATP5A1P25705 553 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SSR2P43308 183 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 RPS5P46782 204 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 GABRA4P48169 554 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 IDH2P48735 452 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 MAN2A2P49641 1150 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 RGS1Q08116 209 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 PPP1R8Q12972 351 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 NNATQ16517 81 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SMN1Q16637 294 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 NDUFA5Q16718 116 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 DUSP7Q16829 419 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 PRSS53Q2L4Q9 553 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TCTE1Q5JU00 501 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 NDUFAF5Q5TEU4 345 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 CDC73Q6P1J9 531 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 CD200R1LQ6Q8B3 271 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 KIRREL2Q6UWL6 708 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 BRIX1Q8TDN6 353 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 UTP15Q8TED0 518 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 METTL21AQ8WXB1 218 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TP53INP1Q96A56 240 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TM4SF19Q96DZ7 209 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 OPALINQ96PE5 141 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 MS4A4EQ96PG1 132 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SERINC2Q96SA4 455 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ACTRT3Q9BYD9 372 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 OR51I1Q9H343 314 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 GLIPR2Q9H4G4 154 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 PRDM7Q9NQW5 492 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ASB6Q9NWX5 421 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TNFRSF10DQ9UBN6 386 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SSR3Q9UNL2 185 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 BAIAP2Q9UQB8 552 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TMEM5Q9Y2B1 443 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 EXOGQ9Y2C4 368 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TEP1Q99973 2627 aaKnown RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 NSG1A0A0A6YYJ2 146 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 A0A1W2PS29 197 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ERVH48-1M5A8F1 160 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 MYL12BO14950 172 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TMPRSS11DO60235 418 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 MAN1A2O60476 641 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 OPN1SWP03999 348 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ALPPP05187 535 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SMIM10L1P0DMW3 83 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 NR2F6P10588 404 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 MYL12AP19105 171 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TNNI3P19429 210 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 AQP1P29972 269 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 GRK5P34947 590 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 AVPR1BP47901 424 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 UQCRFS1P47985 274 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 WNT4P56705 351 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 GPR85P60893 370 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF91Q05481 1191 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 RUNX1T1Q06455 604 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 C19orf57Q0VDD7 668 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 CBX3Q13185 183 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF750Q32MQ0 723 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ARHGAP11BQ3KRB8 267 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 DCAF10Q5QP82 559 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 HACD4Q5VWC8 232 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 HIST2H2BCQ6DN03 193 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SLC27A4Q6P1M0 643 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 C3P1Q6ZMU1 363 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 COX15Q7KZN9 410 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 GID4Q8IVV7 300 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 MMP21Q8N119 569 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 GALNT16Q8N428 558 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 GDPD1Q8N9F7 314 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 POGLUT1Q8NBL1 392 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 OR9Q2Q8NGE9 314 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 OR52N1Q8NH53 320 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 PRR7Q8TB68 274 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TEX47Q8TBZ9 253 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ADAMTS18Q8TE60 1221 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TTC9Q92623 222 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SMIM10Q96HG1 83 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 BBS4Q96RK4 519 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 STACQ99469 402 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SPSB2Q99619 263 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SLC30A2Q9BRI3 323 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 VN1R1Q9GZP7 353 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SAP130Q9H0E3 1048 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ARMC7Q9H6L4 198 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 MTHFD2LQ9H903 347 aaPredicted RBP4.38□□□□□ -1.71
EDEM3-203ENST00000439962 ANKRA2Q9H9E1 313 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SELENONQ9NZV5 590 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 SRPK3Q9UPE1 567 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 HS3ST3B1Q9Y662 390 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms