RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 REXO5Q96IC2 774 aaKnown RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF845Q96IR2 970 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 LRRC37BQ96QE4 947 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 GPATCH1Q9BRR8 931 aaKnown RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 PINK1Q9BXM7 581 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 TMEM185BQ9H7F4 350 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 KCNJ16Q9NPI9 418 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 ADAM21Q9UKJ8 722 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 MCTS1Q9ULC4 181 aaKnown RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 CHST2Q9Y4C5 530 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 DIDO1Q9BTC0 2240 aaKnown RBP10.61□□□□□ -0.71
HSPG2-206ENST00000439717 PRSS44E7EML9 344 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 NDUFAB1O14561 156 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 TNFSF11O14788 317 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 MFN2O95140 757 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 SYNGR4O95473 234 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 TGM6O95932 706 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 GKN3PP0CG01 181 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 AQP1P29972 269 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 SLC7A1P30825 629 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 SFTPDP35247 375 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 CLK1P49759 484 aaKnown RBP10.61□□□□□ -0.71
HSPG2-206ENST00000439717 POLR2HP52434 150 aaKnown RBP10.61□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF136P52737 540 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 CARD18P57730 90 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 COPZ1P61923 177 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 VEZF1Q14119 521 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 PON3Q15166 354 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 TMEM176BQ3YBM2 270 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-206ENST00000439717 FAM91A1Q658Y4 838 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 WBP2NLQ6ICG8 309 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 C8orf82Q6P1X6 216 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-206ENST00000439717 CCDC80Q76M96 950 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 ARMC8Q8IUR7 673 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 LIX1LQ8IVB5 337 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 NAXEQ8NCW5 288 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 ATP6V1C2Q8NEY4 427 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 FIG4Q92562 907 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 OSTF1Q92882 214 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 CPNE4Q96A23 557 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-206ENST00000439717 SFXN3Q9BWM7 321 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 ADAM19Q9H013 955 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 RNF122Q9H9V4 155 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 CTPS2Q9NRF8 586 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 KLHL28Q9NXS3 571 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 CHRNA9Q9UGM1 479 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 SLC13A4Q9UKG4 626 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 ARHGAP21Q5T5U3 1957 aa10.61□□□□□ -0.71
HSPG2-206ENST00000439717 USP9YO00507 2555 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-206ENST00000439717 ASH1LQ9NR48 2969 aaKnown RBP10.6□□□□□ -0.71
HSPG2-206ENST00000439717 FAM90A27PA6NNH2 459 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 FAM220BPB1ANY3 271 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 M0QX08 132 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 CXCL13O43927 109 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 GCM2O75603 506 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-206ENST00000439717 OPN1LWP04000 364 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 C8BP07358 591 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 SHC1P29353 583 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 TACR3P29371 465 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 NUDT2P50583 147 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 RAC3P60763 192 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 SYT14P1Q58G82 188 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 GTF2IRD2BQ6EKJ0 949 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 POMZP3Q6PJE2 187 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 GTF2IRD2Q86UP8 949 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 ADGRG3Q86Y34 549 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 FNDC9Q8TBE3 224 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 RASSF5Q8WWW0 418 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF583Q96ND8 569 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 PRRG4Q9BZD6 226 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 UCK2Q9BZX2 261 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 PIF1Q9H611 641 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 GLRX2Q9NS18 164 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 OSGIN1Q9UJX0 560 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 HDGFL3Q9Y3E1 203 aa10.6□□□□□ -0.71
HSPG2-206ENST00000439717 MED12Q93074 2177 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 DOPEY2Q9Y3R5 2298 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 HEATR5AQ86XA9 2040 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 TMED7-TICAM2A0A0A6YYA0 188 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 SYT5O00445 386 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF208O43345 1280 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 TPST1O60507 370 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 LGI1O95970 557 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 PRG2P13727 222 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 BMP5P22003 454 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 KCNJ5P48544 419 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 CSNK2A1P68400 391 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-206ENST00000439717 TFF3Q07654 80 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 DMTNQ08495 405 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF239Q16600 458 aaKnown RBP10.59□□□□□ -0.71
HSPG2-206ENST00000439717 SP5Q6BEB4 398 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-206ENST00000439717 PLXDC2Q6UX71 529 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 TMPPEQ6ZT21 453 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 SLC15A3Q8IY34 581 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 LSMEM1Q8N8F7 131 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 RELL2Q8NC24 303 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-206ENST00000439717 CCDC197Q8NCU1 140 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 OR2T12Q8NG77 320 aa10.59□□□□□ -0.71
HSPG2-206ENST00000439717 INTS12Q96CB8 462 aaKnown RBP10.59□□□□□ -0.71
HSPG2-206ENST00000439717 DDIT4LQ96D03 193 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms