RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PENKP01210 267 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 OPN1MWP04001 364 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 OPN1MW2P0DN77 364 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 OPN1MW3P0DN78 364 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF17P17021 662 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 PTAFRP25105 342 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ATP5DP30049 168 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 SLC1A6P48664 564 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF133P52736 654 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 NAGLUP54802 743 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 NLRP11P59045 1033 aaKnown RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 UBA52P62987 128 aaKnown RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 GABPAQ06546 454 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 CKAP4Q07065 602 aaKnown RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 IL10RBQ08334 325 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 UGCGQ16739 394 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 CDO1Q16878 200 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 Q5VSD8 79 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 LIPJQ5W064 366 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ABRAXAS1Q6UWZ7 409 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 Q6ZPB1 254 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 CATSPER4Q7RTX7 472 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 PLPPR4Q7Z2D5 763 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 GPR141Q7Z602 305 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 DNAJB7Q7Z6W7 309 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 CDR2LQ86X02 465 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 METTL23Q86XA0 190 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 VSIG1Q86XK7 387 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 UBQLNLQ8IYU4 475 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNRF1Q8ND25 227 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 BEST4Q8NFU0 473 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 OR8H1Q8NGG4 311 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 MCOLN3Q8TDD5 553 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 LIPHQ8WWY8 451 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 CCDC47Q96A33 483 aaKnown RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 VPS33AQ96AX1 596 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 NAA11Q9BSU3 229 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 CALN1Q9BXU9 219 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ULBP3Q9BZM4 244 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 FN3KQ9H479 309 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 C10orf88Q9H8K7 445 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 NMUR1Q9HB89 426 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 RDH14Q9HBH5 336 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 DDX28Q9NUL7 540 aaKnown RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 MRGBPQ9NV56 204 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 SLC17A7Q9P2U7 560 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 RPS6KB2Q9UBS0 482 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 XPO7Q9UIA9 1087 aaKnown RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 TMCC3Q9ULS5 477 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF835Q9Y2P0 537 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 FBXO7Q9Y3I1 522 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 HBS1LQ9Y450 684 aaKnown RBP1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 TRIP11Q15643 1979 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 EXPH5Q8NEV8 1989 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 DNAH5Q8TE73 4624 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 IGKV6-21A0A0C4DH24 114 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 ARL5CA6NH57 179 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 STX6O43752 255 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 CSDE1O75534 798 aaKnown RBP1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC16A8O95907 504 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCDC159P0C7I6 412 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 P0C879 139 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 TSPY3P0CV98 308 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 TSPY8P0CW00 308 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 SKILP12757 684 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 STMN1P16949 149 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 ACAT1P24752 427 aaKnown RBP1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 SSTR1P30872 391 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 GP5P40197 560 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR3A3P47888 321 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF131P52739 623 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 DYNLL1P63167 89 aaKnown RBP1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 RBP5P82980 135 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 CNTN1Q12860 1018 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 ABRAXAS2Q15018 415 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 KIAA0040Q15053 153 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 WDR43Q15061 677 aaKnown RBP eCLIP1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 MAPK11Q15759 364 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 ODF2Q5BJF6 829 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 C6orf136Q5SQH8 315 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC8B1Q6J4K2 584 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 MSANTD1Q6ZTZ1 278 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 GALNTL5Q7Z4T8 443 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 NRARPQ7Z6K4 114 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 SYVN1Q86TM6 617 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 ITIH5Q86UX2 942 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 DOLPP1Q86YN1 238 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 CROCCP3Q8IVE0 287 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCAR2Q8N163 923 aaKnown RBP1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 METTL13Q8N6R0 699 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF781Q8N8C0 355 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 MSANTD4Q8NCY6 345 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR6F1Q8NGZ6 308 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 GRK7Q8WTQ7 553 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 CT55Q8WUE5 264 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 EXT2Q93063 718 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 TBC1D31Q96DN5 1066 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 CFAP53Q96M91 514 aa1.83□□□□□ -2.12
HMGB1P18-201ENST00000438801 EBF4Q9BQW3 602 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms