RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PLCL2Q9UPR0 1127 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 CDH10Q9Y6N8 788 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 RP1P56715 2156 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 IGHV1OR21-1A0A087WYE8 117 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 ZC3H12DA2A288 527 aaKnown RBP12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC35F4A4IF30 521 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 CHST10O43529 356 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 CDC123O75794 336 aaPredicted RBP12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 NID1P14543 1247 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 KCNAB1Q14722 419 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 P2RY14Q15391 338 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 OR1Q1Q15612 314 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 BTBD16Q32M84 506 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 AADACL4Q5VUY2 407 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 CPOQ8IVL8 374 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 CDRT4Q8N9R6 151 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 UFD1Q92890 307 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 RFKQ969G6 155 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC25A46Q96AG3 418 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 WDFY2Q96P53 400 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 GFM1Q96RP9 751 aaKnown RBP12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 TEX12Q9BXU0 123 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 HDHD5Q9BXW7 423 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 RAB33BQ9H082 229 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 MED20Q9H944 212 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 NLKQ9UBE8 527 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 EPHA6Q9UF33 1036 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 ALG5Q9Y673 324 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 TRAPPC13A5PLN9 417 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 PLOD3O60568 738 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 THBS1P07996 1170 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 ZGLP1P0C6A0 271 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 MAKP20794 623 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 UQCRC1P31930 480 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 FABP5Q01469 135 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 CSTF1Q05048 431 aaKnown RBP12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 INSL4Q14641 139 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 PLK5Q496M5 336 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 LAMTOR1Q6IAA8 161 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 ENKURQ8TC29 256 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 FANK1Q8TC84 345 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 GRHL3Q8TE85 626 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 TRIM63Q969Q1 353 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 DCLRE1CQ96SD1 692 aaKnown RBP12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 ARHGAP9Q9BRR9 750 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 UBQLN3Q9H347 655 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 FSCN3Q9NQT6 498 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 COMMD3Q9UBI1 195 aa12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
PTCHD3-201ENST00000438700 IRGMA1A4Y4 181 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 CDHR4A6H8M9 788 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 FOXS1O43638 330 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 SCO1O75880 301 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 DBIP07108 87 aaKnown RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 TRAPPC2P0DI81 140 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 TRAPPC2BP0DI82 140 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 GLB1P16278 677 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 ALAS2P22557 587 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 GZMKP49863 264 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 FXYD6P3P58550 94 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF155Q12901 538 aaPredicted RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 PLBD1Q6P4A8 553 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 SIRT6Q8N6T7 355 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 OR51G2Q8NGK0 314 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 KCTD7Q96MP8 289 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 DUSP22Q9NRW4 184 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 CBLCQ9ULV8 474 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 SF3B6Q9Y3B4 125 aaKnown RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 IQCMA0A1B0GVH7 501 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 A0A1W2PQ72 361 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC30A4O14863 429 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 DUX1O43812 170 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 OR10H2O60403 315 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 TSC22D2O75157 780 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 CELP19835 753 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 RPS4Y1P22090 263 aaKnown RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 MAT1AQ00266 395 aaKnown RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 PLAURQ03405 335 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 CFHR1Q03591 330 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 C19orf57Q0VDD7 668 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 MGAT2Q10469 447 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 QPRTQ15274 297 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 PRR23CQ6ZRP0 262 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 MAML2Q8IZL2 1156 aaPredicted RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 METTL27Q8N6F8 245 aaPredicted RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 OR52R1Q8NGF1 315 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 TMEM239Q8WW34 195 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 ANKRD9Q96BM1 317 aaPredicted RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 CD180Q99467 661 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 SIDT1Q9NXL6 827 aaKnown RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 H2AFY2Q9P0M6 372 aaPredicted RBP12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 PILRBQ9UKJ0 227 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 HSPB11Q9Y547 144 aa12.8□□□□□ -0.36
PTCHD3-201ENST00000438700 A0A087WV62 115 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms