RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GGT1P19440 569 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 PGCP20142 388 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 SHC1P29353 583 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 ALDH3A1P30838 453 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 SERPINB5P36952 375 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 CDH11P55287 796 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 RAC3P60763 192 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 CSNK2A1P68400 391 aaPredicted RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 BSPH1Q075Z2 132 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 RASGEF1BQ0VAM2 473 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 MERTKQ12866 999 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 TNK1Q13470 666 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 PTGR1Q14914 329 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 PPA1Q15181 289 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 QPRTQ15274 297 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 TSC22D1Q15714 1073 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 NDUFAF6Q330K2 333 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 KLHL26Q53HC5 615 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 PDZK1Q5T2W1 519 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 SFRP5Q5T4F7 317 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 IL23RQ5VWK5 629 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 Q6ZT83 130 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 EIF3MQ7L2H7 374 aaKnown RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 NUFIP2Q7Z417 695 aaKnown RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 GALNT5Q7Z7M9 940 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 GABRG1Q8N1C3 465 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 OR5AK3PQ8NH89 298 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 RAB3IL1Q8TBN0 382 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 POC1BQ8TC44 478 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 SLC25A43Q8WUT9 341 aaPredicted RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS50-204ENST00000438395 ST8SIA1Q92185 356 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 UTP4Q969X6 686 aaKnown RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 TRIM44Q96DX7 344 aaPredicted RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 NPAS1Q99742 590 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 DUSP26Q9BV47 211 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 BHLHE41Q9C0J9 482 aaPredicted RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 SIRT3Q9NTG7 399 aaPredicted RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 EXD2Q9NVH0 621 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 MKS1Q9NXB0 559 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 GIMAP2Q9UG22 337 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 ICAM5Q9UMF0 924 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 LIPT1Q9Y234 373 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 MXRA5Q9NR99 2828 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 DSCAMO60469 2012 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 ZNF469Q96JG9 3925 aaPredicted RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 IGHV3-15A0A0B4J1V0 119 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 RNF103-CHMP3A0A140T963 221 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 CIB4A0PJX0 185 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 SERINC4A6NH21 518 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 KIAA1324LA8MWY0 1029 aaPredicted RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 SULT2B1O00204 365 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 ANKRD28O15084 1053 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 CRLF1O75462 422 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 GCM2O75603 506 aaPredicted RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 NTN1O95631 604 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 SOD3P08294 240 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 UBTFL6P0CB48 400 aaPredicted RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 CDKN1AP38936 164 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 OR3A2P47893 321 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 NUDT6P53370 316 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 RPS26P62854 115 aaKnown RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 GPR68Q15743 365 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 TOMM34Q15785 309 aaPredicted RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 NRF1Q16656 503 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 ZNF672Q499Z4 452 aaPredicted RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 TIGD2Q4W5G0 525 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 XKR7Q5GH72 579 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 C6orf136Q5SQH8 315 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 NCMAPQ5T1S8 102 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS50-204ENST00000438395 AGAP6Q5VW22 663 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 HEPHL1Q6MZM0 1159 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 SLC22A25Q6T423 547 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 KLHL17Q6TDP4 642 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 CBLN3Q6UW01 205 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 TMEM108Q6UXF1 575 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 ZCCHC23Q6ZST2 131 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 P2RY8Q86VZ1 359 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 PRIMA1Q86XR5 153 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 KRTCAP2Q8N6L1 136 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 VPS37AQ8NEZ2 397 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 KBTBD8Q8NFY9 601 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 OR4A15Q8NGL6 344 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 PIWIL2Q8TC59 973 aaKnown RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 GPR119Q8TDV5 335 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 APH1AQ96BI3 265 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 FAM46AQ96IP4 442 aaKnown RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 RADILQ96JH8 1075 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 SLC35G5Q96KT7 338 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 ADAD1Q96M93 576 aaKnown RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 OR7D2Q96RA2 312 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 RHNO1Q9BSD3 238 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 MECRQ9BV79 373 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 REG4Q9BYZ8 158 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 NMUR2Q9GZQ4 415 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 QRSL1Q9H0R6 528 aaKnown RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 CXorf36Q9H7Y0 433 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 COQ10BQ9H8M1 238 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms