RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ARL9Q6T311 187 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 NR2C2APQ86WQ0 139 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 C1orf210Q8IVY1 113 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 POGLUT1Q8NBL1 392 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 IL17RDQ8NFM7 739 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 SENP5Q96HI0 755 aaPredicted RBP8.74□□□□□ -1.01
CUX1-206ENST00000437600 CD180Q99467 661 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 KLHDC3Q9BQ90 382 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PRRG3Q9BZD7 231 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 FLRT3Q9NZU0 649 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 ADAM18Q9Y3Q7 739 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PTPRZ1P23471 2315 aaPredicted RBP8.74□□□□□ -1.01
CUX1-206ENST00000437600 IGHV5-51A0A0C4DH38 117 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 A0A1B0GVT2 93 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CDHR4A6H8M9 788 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 J3QLW9 94 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 SYT5O00445 386 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 SLC30A4O14863 429 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 RGS13O14921 159 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 GALR3O60755 368 aaPredicted RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 PPP1R3DO95685 299 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CBX7O95931 251 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 PAHP00439 452 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 NME1P15531 152 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 ZNF19P17023 458 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 PAICSP22234 425 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 ALAS2P22557 587 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 MGAT2Q10469 447 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 STX4Q12846 297 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 ELOCQ15369 112 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 DECR1Q16698 335 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 MINDY4Q4G0A6 757 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CCDC58Q4VC31 144 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 RNASE12Q5GAN4 147 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 POMZP3Q6PJE2 187 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 MCATQ8IVS2 390 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 CA13Q8N1Q1 262 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 C19orf47Q8N9M1 422 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 SLC37A3Q8NCC5 494 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 OR4K13Q8NH42 304 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 NEIL3Q8TAT5 605 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 NT5CQ8TCD5 201 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 OSTF1Q92882 214 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 UFD1Q92890 307 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 ZNF764Q96H86 408 aaPredicted RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 ZNF649Q9BS31 505 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CACYBPQ9HB71 228 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 GPR27Q9NS67 375 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 PTGFRNQ9P2B2 879 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CRNNQ9UBG3 495 aaPredicted RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 PHF11Q9UIL8 331 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 POMT2Q9UKY4 750 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CMAHPQ9Y471 501 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 URADA6NGE7 173 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 UNC119BA6NIH7 251 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 SAGE2PA6NJ88 616 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 OR5K4A6NMS3 321 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 DYRK3O43781 588 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CCNKO75909 580 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 IFNA16P05015 189 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 KRT8P05787 483 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 PROS1P07225 676 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 FPR3P25089 353 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 SHC1P29353 583 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 GRPRP30550 384 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CASP3P42574 277 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 OR2B6P58173 313 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 OR10A3P58181 314 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 OR12D2P58182 307 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 RACK1P63244 317 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 CRYZQ08257 329 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 CRMP1Q14194 572 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 NDUFA9Q16795 377 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 FHL5Q5TD97 284 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 LINC00299Q6ZSB3 139 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 RFPL4BQ6ZWI9 263 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 SSX6Q7RTT6 188 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 ZNF619Q8N2I2 560 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 RCBTB1Q8NDN9 531 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 FANK1Q8TC84 345 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 ZNRF4Q8WWF5 429 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 MOAP1Q96BY2 351 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 CPNE5Q9HCH3 593 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 DDX28Q9NUL7 540 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 CALML5Q9NZT1 146 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 URB1O60287 2271 aaKnown RBP8.73□□□□□ -1.01
CUX1-206ENST00000437600 MPDZO75970 2070 aa8.73□□□□□ -1.01
CUX1-206ENST00000437600 A0A087WV48 116 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 TRAPPC13A5PLN9 417 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 GABRPO00591 440 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 APOA1P02647 267 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 NID1P14543 1247 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 OR1D5P58170 312 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 FOXK2Q01167 660 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 C3orf38Q5JPI3 329 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 IDNKQ5T6J7 187 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 VASNQ6EMK4 673 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 PAMR1Q6UXH9 720 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 TMEM91Q6ZNR0 172 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 OAFQ86UD1 273 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms