RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MED19A0JLT2 244 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 ELOA3DA6NLF2 546 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 KIR3DP1A8MWS1 328 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 FAM47E-STBD1D6RA91 191 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 ETV2O00321 342 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 NME2P1O60361 137 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 CBR3O75828 277 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 NME2P22392 152 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 CBLP22681 906 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 IFNGR2P38484 337 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 DAPP51397 102 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 GPR85P60893 370 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 KCNAB2Q13303 367 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 ELOA3BQ3SY89 546 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 ANKRD34AQ69YU3 496 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 KDM4DQ6B0I6 523 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 TTC33Q6PID6 262 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 ARSKQ6UWY0 536 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 ELOA3Q8NG57 546 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 C5orf34Q96MH7 638 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 VDAC3Q9Y277 283 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 A0A087WV48 116 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 NTN1O95631 604 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 TNFSF10P50591 281 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 POLR2HP52434 150 aaKnown RBP20.89■□□□□ 0.93
CPSF4-204ENST00000436336 AQP4P55087 323 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 SLC25A53Q5H9E4 307 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 PGBD2Q6P3X8 592 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 BORAQ6PGQ7 559 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 AQP11Q8NBQ7 271 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 OR2M7Q8NG81 312 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 SCMH1Q96GD3 660 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 GNRHR2Q96P88 292 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 KRCC1Q9NPI7 259 aaPredicted RBP20.89■□□□□ 0.93
CPSF4-204ENST00000436336 TUBA8Q9NY65 449 aaPredicted RBP20.89■□□□□ 0.93
CPSF4-204ENST00000436336 TMEFF2Q9UIK5 374 aaPredicted RBP20.89■□□□□ 0.93
CPSF4-204ENST00000436336 OSGIN1Q9UJX0 560 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 BOKQ9UMX3 212 aaPredicted RBP20.89■□□□□ 0.93
CPSF4-204ENST00000436336 MED31Q9Y3C7 131 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 PCDHGB6Q9Y5F9 930 aa20.89■□□□□ 0.93
CPSF4-204ENST00000436336 A0A087WZY1 265 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 ADAP00813 363 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 GASTP01350 101 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 UGT2B15P54855 530 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 DSCR4P56555 118 aaPredicted RBP20.88■□□□□ 0.93
CPSF4-204ENST00000436336 LSM11P83369 360 aaKnown RBP eCLIP20.88■□□□□ 0.933e-6■□□□□ 9.4
CPSF4-204ENST00000436336 PLPPR5Q32ZL2 321 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 C1orf94Q6P1W5 598 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 SULF2Q8IWU5 870 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 NRMQ8IXM6 262 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 PIGXQ8TBF5 258 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 TM9SF4Q92544 642 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 MRGPRX4Q96LA9 322 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 ZNF184Q99676 751 aaPredicted RBP20.88■□□□□ 0.93
CPSF4-204ENST00000436336 HES7Q9BYE0 225 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 ZNF556Q9HAH1 456 aa20.88■□□□□ 0.93
CPSF4-204ENST00000436336 IGFBP5P24593 272 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 CXCR1P25024 350 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 PRICKLE2Q7Z3G6 844 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 ZER1Q7Z7L7 766 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 TMEM178AQ8NBL3 297 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 DNAJC9Q8WXX5 260 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 DTNBP1Q96EV8 351 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 RDH12Q96NR8 316 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 TMEM43Q9BTV4 400 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 DGCR6LQ9BY27 220 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 ZFP64Q9NPA5 681 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 KLHL1Q9NR64 748 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 KRT84Q9NSB2 600 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 SMPD3Q9NY59 655 aaPredicted RBP20.87■□□□□ 0.93
CPSF4-204ENST00000436336 ORC6Q9Y5N6 252 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 FRYQ5TBA9 3013 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 FREM3P0C091 2139 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 C7orf72A4D263 438 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 PINLYPA6NC86 204 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 LRRC3CA6NJW4 275 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 KLRC4-KLRK1H3BQV0 150 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 TAF4O00268 1085 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 DPP4P27487 766 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 APOBEC1P41238 236 aaKnown RBP20.87■□□□□ 0.93
CPSF4-204ENST00000436336 RAD23AP54725 363 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 FOXO1Q12778 655 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 MERTKQ12866 999 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 RFX4Q33E94 735 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 ZNF766Q5HY98 468 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 GALNTL5Q7Z4T8 443 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 SNRNP27Q8WVK2 155 aaKnown RBP20.87■□□□□ 0.93
CPSF4-204ENST00000436336 ZBTB8AQ96BR9 441 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 NIPSNAP1Q9BPW8 284 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 SLC19A3Q9BZV2 496 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 C15orf41Q9Y2V0 281 aa20.87■□□□□ 0.93
CPSF4-204ENST00000436336 TMED7-TICAM2A0A0A6YYA0 188 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 PIP5K1CO60331 668 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 EIF1P41567 113 aaKnown RBP20.86■□□□□ 0.93
CPSF4-204ENST00000436336 OMPP47874 163 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 PRKCDQ05655 676 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 FOXF1Q12946 379 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 IGFL3Q6UXB1 125 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 GNPDA2Q8TDQ7 276 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 ZCCHC14Q8WYQ9 949 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms