RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 C6orf136Q5SQH8 315 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 NCMAPQ5T1S8 102 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS50-203ENST00000436177 AGAP6Q5VW22 663 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 HEPHL1Q6MZM0 1159 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 SLC22A25Q6T423 547 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 KLHL17Q6TDP4 642 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 CBLN3Q6UW01 205 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 TMEM108Q6UXF1 575 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 ZCCHC23Q6ZST2 131 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 P2RY8Q86VZ1 359 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 PRIMA1Q86XR5 153 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 KRTCAP2Q8N6L1 136 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 VPS37AQ8NEZ2 397 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 KBTBD8Q8NFY9 601 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 OR4A15Q8NGL6 344 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 PIWIL2Q8TC59 973 aaKnown RBP6.88□□□□□ -1.31
VPS50-203ENST00000436177 GPR119Q8TDV5 335 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 APH1AQ96BI3 265 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 RADILQ96JH8 1075 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 SLC35G5Q96KT7 338 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 ADAD1Q96M93 576 aaKnown RBP6.88□□□□□ -1.31
VPS50-203ENST00000436177 OR7D2Q96RA2 312 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 RHNO1Q9BSD3 238 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 MECRQ9BV79 373 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 REG4Q9BYZ8 158 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 NMUR2Q9GZQ4 415 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 QRSL1Q9H0R6 528 aaKnown RBP6.88□□□□□ -1.31
VPS50-203ENST00000436177 CXorf36Q9H7Y0 433 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 COQ10BQ9H8M1 238 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 BCO1Q9HAY6 547 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 YAE1D1Q9NRH1 226 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
VPS50-203ENST00000436177 MAGED1Q9Y5V3 778 aaPredicted RBP6.88□□□□□ -1.31
VPS50-203ENST00000436177 ZNF724A8MTY0 619 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 GPR171O14626 319 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 ABCD4O14678 606 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SMAD9O15198 467 aaKnown RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 TLX2O43763 284 aaPredicted RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 CYTIPO60759 359 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SPAG7O75391 227 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 UQCRBP14927 111 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 MATN1P21941 496 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 CHI3L1P36222 383 aaPredicted RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 ACVR1BP36896 505 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 DIO1P49895 249 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 KHKP50053 298 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 ANXA11P50995 505 aaKnown RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 SESN3P58005 492 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SKP2Q13309 424 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 GNA13Q14344 377 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SYT14P1Q58G82 188 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SLC25A53Q5H9E4 307 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 EXOSC6Q5RKV6 272 aaKnown RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 TIMM23BQ5SRD1 257 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 KLHL24Q6TFL4 600 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 CLEC2AQ6UVW9 174 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 KIRREL3Q8IZU9 778 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 FBXL14Q8N1E6 418 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 MAPK1IP1LQ8NDC0 245 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 OR5D16Q8NGK9 328 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 PSMA8Q8TAA3 256 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 PIGXQ8TBF5 258 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 IGFBPL1Q8WX77 278 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 COQ8BQ96D53 544 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SDF2Q99470 211 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 KLHDC3Q9BQ90 382 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 PSD2Q9BQI7 771 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 THUMPD3Q9BV44 507 aaKnown RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 LAT2Q9GZY6 243 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SLCO5A1Q9H2Y9 848 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 ANKZF1Q9H8Y5 726 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 CACYBPQ9HB71 228 aaKnown RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 CISD1Q9NZ45 108 aaKnown RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 SLC17A7Q9P2U7 560 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 MGAT4BQ9UQ53 548 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 SLC35A3Q9Y2D2 325 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 NOSIPQ9Y314 301 aaKnown RBP6.87□□□□□ -1.31
VPS50-203ENST00000436177 WDR45Q9Y484 360 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 KCNE3Q9Y6H6 103 aa6.87□□□□□ -1.31
VPS50-203ENST00000436177 OR5H1A6NKK0 313 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 RNF212BA8MTL3 300 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 C9JVG2 144 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 NPIPB9F8W1W9 429 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 EFNA2O43921 213 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 SSX4O60224 188 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 MRPL33O75394 65 aaKnown RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 RAD51DO75771 328 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 H6PDO95479 791 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 IGHV3-9P01782 118 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 MYZAPP0CAP1 466 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 DHRS4L1P0CG22 281 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 G6PDP11413 515 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 FKBP2P26885 142 aaKnown RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 RYKP34925 604 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 APOBEC1P41238 236 aaKnown RBP6.86□□□□□ -1.31
VPS50-203ENST00000436177 ZNF83P51522 516 aa6.86□□□□□ -1.31
VPS50-203ENST00000436177 C21orf58P58505 322 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms