RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DHRS4L2Q6PKH6 230 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 XKRXQ6PP77 449 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 C16orf89Q6UX73 402 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 CLEC18BQ6UXF7 455 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 RANBP3LQ86VV4 465 aaPredicted RBP13.97□□□□□ -0.17
TREX1-201ENST00000433541 CALHM3Q86XJ0 350 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 SLC15A3Q8IY34 581 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 FITM2Q8N6M3 262 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 CLEC18CQ8NCF0 446 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 TNIP2Q8NFZ5 429 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 OR10D3Q8NH80 312 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 OR2V1Q8NHB1 315 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 VANGL1Q8TAA9 524 aaPredicted RBP13.97□□□□□ -0.17
TREX1-201ENST00000433541 ITLN2Q8WWU7 325 aaPredicted RBP13.97□□□□□ -0.17
TREX1-201ENST00000433541 RASSF5Q8WWW0 418 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 ASB5Q8WWX0 329 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 FIG4Q92562 907 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 PROX1Q92786 737 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 DNAJA3Q96EY1 480 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 TM9SF2Q99805 663 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 PAQR5Q9NXK6 330 aaPredicted RBP13.97□□□□□ -0.17
TREX1-201ENST00000433541 NDE1Q9NXR1 346 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 CHRNA9Q9UGM1 479 aa13.97□□□□□ -0.17
TREX1-201ENST00000433541 INTS1Q8N201 2190 aaKnown RBP13.97□□□□□ -0.17
TREX1-201ENST00000433541 TMED7-TICAM2A0A0A6YYA0 188 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 A0A0G2JNJ9 132 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 CD8B2A6NJW9 211 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 HSPB2A8KAH6 182 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 KDM4EB2RXH2 506 aaPredicted RBP13.96□□□□□ -0.17
TREX1-201ENST00000433541 NME4O00746 187 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 TPST1O60507 370 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 ADAM11O75078 769 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 MFN2O95140 757 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 PLGP00747 810 aaPredicted RBP13.96□□□□□ -0.17
TREX1-201ENST00000433541 FCGR2AP12318 317 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 PRG2P13727 222 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 PSMA4P25789 261 aaKnown RBP13.96□□□□□ -0.17
TREX1-201ENST00000433541 TACR3P29371 465 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 SLC1A3P43003 542 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 GZMMP51124 257 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 PCBP3P57721 371 aaKnown RBP13.96□□□□□ -0.17
TREX1-201ENST00000433541 CARD18P57730 90 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 HSPB2Q16082 182 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 GLIPR1L2Q4G1C9 344 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 SLC25A53Q5H9E4 307 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 RIPPLY2Q5TAB7 128 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 GGNQ86UU5 652 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 MCEMP1Q8IX19 187 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 GCNT2Q8N0V5 402 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 OR52E4Q8NGH9 312 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 SLC25A43Q8WUT9 341 aaPredicted RBP13.96□□□□□ -0.17
TREX1-201ENST00000433541 WNT2BQ93097 391 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 ZNF524Q96C55 264 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 DDIT4LQ96D03 193 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 ZNF845Q96IR2 970 aaPredicted RBP13.96□□□□□ -0.17
TREX1-201ENST00000433541 NSL1Q96IY1 281 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 TPD52L3Q96J77 140 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 GPATCH1Q9BRR8 931 aaKnown RBP13.96□□□□□ -0.17
TREX1-201ENST00000433541 Q9UFV3 132 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
TREX1-201ENST00000433541 COL12A1Q99715 3063 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 A0A0J9YW62 118 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 A0A1W2PNR3 127 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 DVL2O14641 736 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 DNAJA2O60884 412 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 CLDN14O95500 239 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 TMIGD3P0DMS9 266 aaPredicted RBP13.95□□□□□ -0.18
TREX1-201ENST00000433541 TCN1P20061 433 aaPredicted RBP13.95□□□□□ -0.18
TREX1-201ENST00000433541 BMP5P22003 454 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 SHC1P29353 583 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 TIMP3P35625 211 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 ACAA2P42765 397 aaKnown RBP13.95□□□□□ -0.18
TREX1-201ENST00000433541 GSK3BP49841 420 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 SLC25A3Q00325 362 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 VEZF1Q14119 521 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 KRT72Q14CN4 511 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 SYT14P1Q58G82 188 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 FAM91A1Q658Y4 838 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 RNF148Q8N7C7 305 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 C9orf106Q8NAJ2 232 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 FNDC9Q8TBE3 224 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 OSTF1Q92882 214 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 FAM162AQ96A26 154 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 TAMM41Q96BW9 452 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 INTS12Q96CB8 462 aaKnown RBP13.95□□□□□ -0.18
TREX1-201ENST00000433541 CLCF1Q9UBD9 225 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 TESQ9UGI8 421 aaKnown RBP13.95□□□□□ -0.18
TREX1-201ENST00000433541 SLC9A8Q9Y2E8 581 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 ICE1Q9Y2F5 2266 aa13.95□□□□□ -0.18
TREX1-201ENST00000433541 MBD3L4A6NDZ8 208 aaPredicted RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 MBD3L3A6NE82 208 aaPredicted RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 MBD3L5A6NJ08 208 aaPredicted RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 ELOA3DA6NLF2 546 aaPredicted RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 B2RBV5 119 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 PRSS44E7EML9 344 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 M0R3H8 397 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 SULT2B1O00204 365 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 FAAHO00519 579 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 EFNA2O43921 213 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms