RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ANKRD60Q9BZ19 345 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 CNIH4Q9P003 139 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 ABI3Q9P2A4 366 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 ANKUB1A6NFN9 424 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ZNF891A8MT65 544 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-206ENST00000431390 NKX2-8O15522 239 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 PNMTP11086 282 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 SLC1A3P43003 542 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 HLCSP50747 726 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 IL1RL1Q01638 556 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 COX10Q12887 443 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 KCNAB2Q13303 367 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ATP1A1-AS1Q5TC04 95 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ABHD17BQ5VST6 288 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 SLC22A10Q63ZE4 541 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 BICRALQ6AI39 1079 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 CD300LDQ6UXZ3 194 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ZER1Q7Z7L7 766 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 BEST3Q8N1M1 668 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ZNF555Q8NEP9 628 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ZNF563Q8TA94 476 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 RNF217Q8TC41 542 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 GNPDA2Q8TDQ7 276 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 GPR119Q8TDV5 335 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 CYGBQ8WWM9 190 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ANGPTL4Q9BY76 406 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 FAM118AQ9NWS6 357 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 PPP4R1LQ9P1A2 415 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 A0A087WUJ7 227 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ANKRD33BA6NCL7 494 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 C17orf51A8MQB3 221 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 SLC16A6O15403 523 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 NUDT14O95848 222 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 WT1P19544 449 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-206ENST00000431390 GSTM3P21266 225 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 OMPP47874 163 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ZNF468Q5VIY5 522 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-206ENST00000431390 CCDC81Q6ZN84 652 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 CHERPQ8IWX8 916 aaKnown RBP16.6■□□□□ 0.25
HMGN1-206ENST00000431390 NRMQ8IXM6 262 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 CYP4Z2PQ8N1L4 340 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 GALNT16Q8N428 558 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 MARVELD2Q8N4S9 558 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 GTPBP3Q969Y2 492 aaKnown RBP16.6■□□□□ 0.25
HMGN1-206ENST00000431390 UCK2Q9BZX2 261 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 ADAM19Q9H013 955 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 STMN3Q9NZ72 180 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 POLHQ9Y253 713 aa16.6■□□□□ 0.25
HMGN1-206ENST00000431390 EML6Q6ZMW3 1958 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 ARGFXA6NJG6 315 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 CDC40O60508 579 aaKnown RBP eCLIP16.59■□□□□ 0.25
HMGN1-206ENST00000431390 CCL3P10147 92 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 PRKAR1AP10644 381 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 POU2F1P14859 743 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 MST1P26927 711 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 CYB561P49447 251 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 LSM11P83369 360 aaKnown RBP eCLIP16.59■□□□□ 0.25
HMGN1-206ENST00000431390 CDC20Q12834 499 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 NPRL3Q12980 569 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 TTC33Q6PID6 262 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-206ENST00000431390 KLHL17Q6TDP4 642 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 PRICKLE2Q7Z3G6 844 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 ATG4DQ86TL0 474 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-206ENST00000431390 GRIP2Q9C0E4 1043 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 RIBC2Q9H4K1 309 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 TAS2R10Q9NYW0 307 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 TMEM5Q9Y2B1 443 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 MED31Q9Y3C7 131 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 PCNX3Q9H6A9 2034 aa16.59■□□□□ 0.25
HMGN1-206ENST00000431390 LOC100130705A0A1B0GUX0 176 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 C2orf72A6NCS6 295 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 WISP1O95388 367 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 NTN1O95631 604 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 GP1BBP13224 206 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 CASRP41180 1078 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 GSSP48637 474 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 DLX5P56178 289 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 CTBP2P56545 445 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 ESRRGP62508 458 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 PRKCDQ05655 676 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 TSPAN31Q12999 210 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 QPRTQ15274 297 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 USP51Q70EK9 711 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 TMEM234Q8WY98 164 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 ST8SIA1Q92185 356 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 ZNF570Q96NI8 536 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 KLHDC3Q9BQ90 382 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 SLC19A3Q9BZV2 496 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 PCDHGB6Q9Y5F9 930 aa16.58■□□□□ 0.24
HMGN1-206ENST00000431390 MAST4O15021 2626 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 MED13Q9UHV7 2174 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 HTR3EA5X5Y0 456 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 ELOA3DA6NLF2 546 aaPredicted RBP16.57■□□□□ 0.24
HMGN1-206ENST00000431390 E9PQ18 207 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 SNX4O95219 450 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 OSMP13725 252 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 MYF6P23409 242 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 FPR3P25089 353 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 ST13P50502 369 aaKnown RBP16.57■□□□□ 0.24
HMGN1-206ENST00000431390 RPS6KA3P51812 740 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms