RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SBK3P0C264 359 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 GNG2P59768 71 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 TRMT12Q53H54 448 aaKnown RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 FIP1L1Q6UN15 594 aaKnown RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 ARSKQ6UWY0 536 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 OR1N1Q8NGS0 311 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 PIGQQ9BRB3 760 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 FAM117AQ9C073 453 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 NRSN2Q9GZP1 204 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 RXFP3Q9NSD7 469 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 TMEM181Q9P2C4 612 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 KLHL21Q9UJP4 597 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 TRIOBPQ9H2D6 2365 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 HTR3EA5X5Y0 456 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 XPNPEP2O43895 674 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 FMO6PO60774 539 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CA5AP35218 305 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 TMEM17Q86X19 198 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 GOLM1Q8NBJ4 401 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 LRRC20Q8TCA0 184 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 AGPAT4Q9NRZ5 378 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF638Q14966 1978 aaKnown RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CLIC3O95833 236 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 HTR1AP08908 422 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 ARAFP10398 606 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 DPP4P27487 766 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 UBE2NP61088 152 aaKnown RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CHRNEQ04844 493 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 GINS1Q14691 196 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 SHQ1Q6PI26 577 aaKnown RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 FBXL20Q96IG2 436 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 EMC3Q9P0I2 261 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 RIMS3Q9UJD0 308 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 NPFFR2Q9Y5X5 522 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 A0A1B0GVI7 797 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 TNFRSF1BP20333 461 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CDKN2CP42773 168 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 SELENOVP59797 346 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 PIGGQ5H8A4 983 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 HMBOX1Q6NT76 420 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 PWWP2BQ6NUJ5 590 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 MMP21Q8N119 569 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 OR6Q1Q8NGQ2 317 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CPPED1Q9BRF8 314 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 ABCD2Q9UBJ2 740 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 KLF13Q9Y2Y9 288 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 PEX16Q9Y5Y5 336 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CLDN25C9JDP6 229 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 P2RX6O15547 441 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 IFNA21P01568 189 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 TMEM236Q5W0B7 351 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 D2HGDHQ8N465 521 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CPT1CQ8TCG5 803 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 SLC25A44Q96H78 314 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 FAM46AQ96IP4 442 aaKnown RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 MAELQ96JY0 434 aaKnown RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 A0A0A6YYD5 115 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 SOCS2O14508 198 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 IGLV3-19P01714 112 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 HERV-K104P61576 105 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 CDK10Q15131 360 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 SLC36A3Q495N2 470 aa11.97□□□□□ -0.49
PTCH1-207ENST00000429896 TESQ9UGI8 421 aaKnown RBP11.97□□□□□ -0.49
PTCH1-207ENST00000429896 LOC100130705A0A1B0GUX0 176 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 SLC27A4Q6P1M0 643 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 MAVSQ7Z434 540 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 MARVELD2Q8N4S9 558 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 DTWD1Q8N5C7 304 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 ZFP90Q8TF47 636 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-207ENST00000429896 ZC3H10Q96K80 434 aaKnown RBP11.96□□□□□ -0.49
PTCH1-207ENST00000429896 RDH12Q96NR8 316 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 OR2A5Q96R48 311 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 MED11Q9P086 117 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 TUBA4AP68366 448 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 MRPL2Q5T653 305 aaKnown RBP11.96□□□□□ -0.49
PTCH1-207ENST00000429896 NANOS1Q8WY41 292 aaKnown RBP11.96□□□□□ -0.49
PTCH1-207ENST00000429896 C2orf42Q9NWW7 574 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 AASSQ9UDR5 926 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 GAS6Q14393 721 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 SSPNQ14714 243 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 MTFR2Q6P444 385 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 ARHGAP11AQ6P4F7 1023 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 FN3KQ9H479 309 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 B3GALT1Q9Y5Z6 326 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 SHROOM3Q8TF72 1996 aa11.96□□□□□ -0.49
PTCH1-207ENST00000429896 GXYLT2A0PJZ3 443 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 PRPS1P60891 318 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 ISXQ2M1V0 245 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 MARCH3Q86UD3 253 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 SLC25A45Q8N413 288 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM68Q96MH6 324 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 PLAC1Q9HBJ0 212 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 A4GALTQ9NPC4 353 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 MAN2C1Q9NTJ4 1040 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 PCDHGB2Q9Y5G2 931 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 A0A1W2PR77 199 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 TTLL8A6PVC2 850 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms