RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 BHLHB9Q6PI77 547 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 FRRS1Q6ZNA5 592 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 TMPPEQ6ZT21 453 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 Q6ZT83 130 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 BHLHA15Q7RTS1 189 aaPredicted RBP13.73□□□□□ -0.21
SEC13-210ENST00000428626 MAPK1IP1LQ8NDC0 245 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 XAGE5Q8WWM1 108 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 ST8SIA1Q92185 356 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 HSD17B8Q92506 261 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 ARL5BQ96KC2 179 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 ZIM3Q96PE6 472 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 CCDC106Q9BWC9 280 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 SAP130Q9H0E3 1048 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 CTPS2Q9NRF8 586 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 ACER3Q9NUN7 267 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 NPAP1Q9NZP6 1156 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 KLHL9Q9P2J3 617 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 ADAM21Q9UKJ8 722 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 RAP2CQ9Y3L5 183 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 MAGED1Q9Y5V3 778 aaPredicted RBP13.73□□□□□ -0.21
SEC13-210ENST00000428626 ATRQ13535 2644 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 PRSS51A0A1B0GVH4 220 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 RAMP1O60894 148 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 NDUFS7O75251 213 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 CD3EP07766 207 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 THBS1P07996 1170 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 COX5AP20674 150 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 BGNP21810 368 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 CDKN1AP38936 164 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 RPS4XP62701 263 aaKnown RBP13.72□□□□□ -0.21
SEC13-210ENST00000428626 KRT71Q3SY84 523 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 ZNF672Q499Z4 452 aaPredicted RBP13.72□□□□□ -0.21
SEC13-210ENST00000428626 SYT14P1Q58G82 188 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 WDR93Q6P2C0 686 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 EIF3MQ7L2H7 374 aaKnown RBP13.72□□□□□ -0.21
SEC13-210ENST00000428626 C16orf62Q7Z3J2 963 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 MREGQ8N565 214 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 TESCQ96BS2 214 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 POTEKPQ9BYX7 375 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 NUF2Q9BZD4 464 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 DPY30Q9C005 99 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 TRIM2Q9C040 744 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 OR11A1Q9GZK7 315 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 HAO1Q9UJM8 370 aa13.72□□□□□ -0.21
SEC13-210ENST00000428626 ZNF716A6NP11 495 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 ZNF724A8MTY0 619 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 SHISA9B4DS77 424 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 SULT2B1O00204 365 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 BIRC5O15392 142 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 TMCC2O75069 709 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 CD8AP01732 235 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 IGHV3-9P01782 118 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 GUSBP08236 651 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 ALDOCP09972 364 aaKnown RBP13.71□□□□□ -0.21
SEC13-210ENST00000428626 UQCRC2P22695 453 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 IL12AP29459 219 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 RYKP34925 604 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 SLC1A6P48664 564 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 RPL14P50914 215 aaKnown RBP13.71□□□□□ -0.21
SEC13-210ENST00000428626 FOXG1P55316 489 aaPredicted RBP13.71□□□□□ -0.21
SEC13-210ENST00000428626 CHRNEQ04844 493 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 TNFAIP8L3Q5GJ75 292 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 SMAP2Q8WU79 429 aaPredicted RBP13.71□□□□□ -0.21
SEC13-210ENST00000428626 FBXW5Q969U6 566 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 ROPN1LQ96C74 230 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 NEURL3Q96EH8 262 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 MDFIQ99750 246 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 ESRP2Q9H6T0 727 aaKnown RBP13.71□□□□□ -0.21
SEC13-210ENST00000428626 EXD2Q9NVH0 621 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 WDR45Q9Y484 360 aa13.71□□□□□ -0.21
SEC13-210ENST00000428626 COL6A5A8TX70 2615 aa13.71□□□□□ -0.22
SEC13-210ENST00000428626 IGKV3D-15A0A087WSY6 115 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 HMGN4O00479 90 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 AP3D1O14617 1153 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 IGHV4-39P01824 125 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 MYZAPP0CAP1 466 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 PGCP20142 388 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 PTNP21246 168 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 NME5P56597 212 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 UFM1P61960 85 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 STK11Q15831 433 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 FAM174BQ3ZCQ3 159 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 MTDHQ86UE4 582 aaKnown RBP13.7□□□□□ -0.22
SEC13-210ENST00000428626 ADGRG3Q86Y34 549 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 ZNF433Q8N7K0 673 aaPredicted RBP13.7□□□□□ -0.22
SEC13-210ENST00000428626 ANKFN1Q8N957 763 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 CNOT9Q92600 299 aaKnown RBP13.7□□□□□ -0.22
SEC13-210ENST00000428626 SLC35A5Q9BS91 424 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 LIPT1Q9Y234 373 aa13.7□□□□□ -0.22
SEC13-210ENST00000428626 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.7□□□□□ -0.22
SEC13-210ENST00000428626 FBN1P35555 2871 aaKnown RBP13.69□□□□□ -0.22
SEC13-210ENST00000428626 RNF223E7ERA6 249 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 RGS16O15492 202 aaPredicted RBP13.69□□□□□ -0.22
SEC13-210ENST00000428626 PGM3O95394 542 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 CHRM4P08173 479 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 TFPIP10646 304 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 LBPP18428 481 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 ACVR1BP36896 505 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 CDKN2CP42773 168 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms