RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PPP5CP53041 499 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 RPS26P11Q5JNZ5 115 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 FBXW12Q6X9E4 464 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 CPEB3Q8NE35 698 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 OR4A16Q8NH70 328 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ADAMTS16Q8TE57 1224 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 CMSS1Q9BQ75 279 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 VN1R3Q9BXE9 311 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF334Q9HCZ1 680 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 PLCXD1Q9NUJ7 323 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 GNG12Q9UBI6 72 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 SLC23A2Q9UGH3 650 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 RIMS3Q9UJD0 308 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 MRPS2Q9Y399 296 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 PRELID3BQ9Y3B1 194 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 STRCP1A6NGW2 1772 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 GSTP1P09211 210 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 CCL11P51671 97 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 RPS18P62269 152 aaKnown RBP8.38□□□□□ -1.07
CTNND1-208ENST00000428599 RGNQ15493 299 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 LTC4SQ16873 150 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 FAM26DQ5JW98 314 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 OR51L1Q8NGJ5 315 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF778Q96MU6 729 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 NME7Q9Y5B8 376 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 ENPP4Q9Y6X5 453 aa8.38□□□□□ -1.07
CTNND1-208ENST00000428599 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ANTXRLA6NF34 631 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 AQP9O43315 295 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SLC22A5O76082 557 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TMEM11P17152 192 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 PRKACBP22694 351 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 EPHA5P54756 1037 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SLC6A19Q695T7 634 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 PNCKQ6P2M8 343 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SBSNQ6UWP8 590 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 HTR3DQ70Z44 454 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 NAA40Q86UY6 237 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 CCDC28AQ8IWP9 274 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 PRRC1Q96M27 445 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ADOQ96SZ5 270 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TMEM59Q9BXS4 323 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 NMNAT2Q9BZQ4 307 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 AGPAT4Q9NRZ5 378 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 OR6C2Q9NZP2 312 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 COL22A1Q8NFW1 1626 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 CRYM-AS1A6NIL9 109 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SH2D7A6NKC9 451 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 EGFP01133 1207 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 LAMP1P11279 417 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 GGT1P19440 569 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ERVFC1P60507 584 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 NFATC4Q14934 902 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 LTB4RQ15722 352 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 BLOC1S3Q6QNY0 202 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 CBARPQ8N350 705 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 MINDY1Q8N5J2 469 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SDR9C7Q8NEX9 313 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ASB17Q8WXJ9 295 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ISOC1Q96CN7 298 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SAT2Q96F10 170 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TIMM29Q9BSF4 260 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 DMRT3Q9NQL9 472 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ASF1BQ9NVP2 202 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 HHLA2Q9UM44 414 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 N4BP2Q86UW6 1770 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 DEFA4P12838 97 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 PGGT1BP53609 377 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TRA2BP62995 288 aaKnown RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 DCDP81605 110 aaKnown RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 KCNIP4Q6PIL6 250 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 AAED1Q7RTV5 226 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TMEM135Q86UB9 458 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TMEFF1Q8IYR6 380 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF687Q8N1G0 1237 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF419Q96HQ0 510 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 BTBD2Q9BX70 525 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 UBQLN4Q9NRR5 601 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 PCDHGA1Q9Y5H4 931 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 MYH10P35580 1976 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SMAD6O43541 496 aaKnown RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 LDB3O75112 727 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 OPN1LWP04000 364 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ERVK-25P63136 954 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 MRPS10P82664 201 aaKnown RBP8.37□□□□□ -1.07
CTNND1-208ENST00000428599 MAP4K2Q12851 820 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 OR4D1Q15615 310 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ADAMTS19Q8TE59 1207 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 MYLIPQ8WY64 445 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 CDS1Q92903 461 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SORCS2Q96PQ0 1159 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 EGLN1Q9GZT9 426 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 SLC6A20Q9NP91 592 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 ARMC1Q9NVT9 282 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TAAR2Q9P1P5 351 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 C5AR2Q9P296 337 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 B3GAT1Q9P2W7 334 aa8.37□□□□□ -1.07
CTNND1-208ENST00000428599 TNRC6CQ9HCJ0 1690 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms