RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 MNTQ99583 582 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 ZDHHC5Q9C0B5 715 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 SLC38A1Q9H2H9 487 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 POT1Q9NUX5 634 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 PFDN2Q9UHV9 154 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 PCDHGA9Q9Y5G4 932 aaKnown RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 PCDHGA5Q9Y5G8 931 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 SNRNP200O75643 2136 aaKnown RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 NARSO43776 548 aaKnown RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 LILRB5O75023 590 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 MT-ND5P03915 603 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 IL9P15248 144 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 EPCAMP16422 314 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 CFL1P23528 166 aaKnown RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 F8A1P23610 371 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 CRMP1Q14194 572 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 IKBIPQ70UQ0 350 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 FAM129CQ86XR2 697 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 LRRC56Q8IYG6 542 aaPredicted RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 DNAAF1Q8NEP3 725 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 OR8K3Q8NH51 312 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 SUN3Q8TAQ9 357 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 FANK1Q8TC84 345 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 TFGQ92734 400 aaPredicted RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 OR7D2Q96RA2 312 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 UBL7Q96S82 380 aaPredicted RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 ADAT1Q9BUB4 502 aaKnown RBP12.49□□□□□ -0.41
LRCH3-203ENST00000425562 LGR4Q9BXB1 951 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
LRCH3-203ENST00000425562 OR2W5A6NFC9 320 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 OTOL1A6NHN0 477 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 H0YC42 278 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 UBL3O95164 117 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 PCCBP05166 539 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 NAT2P11245 290 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 PTBP1P26599 531 aaKnown RBP eCLIP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 WASP42768 502 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 KHKP50053 298 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 CCR9P51686 369 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 TAS2R38P59533 333 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 ST8SIA6P61647 398 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 KLF9Q13886 244 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 YOD1Q5VVQ6 348 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 OTPQ5XKR4 325 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 KIAA1211LQ6NV74 962 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 WDR88Q6ZMY6 472 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 HDDC3Q8N4P3 179 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 SHARPINQ9H0F6 387 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 IL20Q9NYY1 176 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 PIPOXQ9P0Z9 390 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 FLRT2O43155 660 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 TMIGD3P0DMS9 266 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 EPXP11678 715 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 PSMB1P20618 241 aaKnown RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 NTSP30990 170 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 KCNAB1Q14722 419 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 HLXQ14774 488 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 ATXN7L3Q14CW9 347 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 DHCR24Q15392 516 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 ETFDHQ16134 617 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 C11orf88Q6PI97 169 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 MEPCEQ7L2J0 689 aaKnown RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 SLC44A3Q8N4M1 653 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 TMEM138Q9NPI0 162 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 MRTO4Q9UKD2 239 aaKnown RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 PPP1R3DO95685 299 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 CEBPBP17676 345 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 BMP7P18075 431 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 CERS1P27544 350 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 ERVK-25P63136 954 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 LRRC37A5PQ49AS3 106 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 RGS7BPQ6MZT1 257 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 ACOT11Q8WXI4 607 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 SMPDL3BQ92485 455 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 TEAD3Q99594 435 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 AIF1LQ9BQI0 150 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 AICDAQ9GZX7 198 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 SYNPO2LQ9H987 977 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 MARK1Q9P0L2 795 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 GNG8Q9UK08 70 aa12.48□□□□□ -0.41
LRCH3-203ENST00000425562 EXOGQ9Y2C4 368 aaKnown RBP12.48□□□□□ -0.41
LRCH3-203ENST00000425562 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 A0A1W2PR48 441 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 SUSD5O60279 629 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 ZNF35P13682 527 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 SOX2P48431 317 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 SNRPNP63162 240 aaKnown RBP12.47□□□□□ -0.41
LRCH3-203ENST00000425562 CLVS2Q5SYC1 327 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 DCAF12L2Q5VW00 463 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 FAM46CQ5VWP2 391 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 FGD2Q7Z6J4 655 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 C12orf76Q8N812 135 aaPredicted RBP12.47□□□□□ -0.41
LRCH3-203ENST00000425562 NUP43Q8NFH3 380 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 C1orf216Q8TAB5 229 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 STK35Q8TDR2 534 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 CDS1Q92903 461 aa12.47□□□□□ -0.41
LRCH3-203ENST00000425562 SPATA5L1Q9BVQ7 753 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms