RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TMPRSS3P57727 454 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 PPP2R2BQ00005 443 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 PRKCDQ05655 676 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 QPRTQ15274 297 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.4□□□□□ -0.9
MDC1-205ENST00000425072 NDUFAF6Q330K2 333 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 WLSQ5T9L3 541 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 PRAMEF20Q5VT98 475 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 TTC23Q5W5X9 447 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 KDM4DQ6B0I6 523 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 SPINK14Q6IE38 97 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 OR5M10Q6IEU7 315 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 INO80CQ6PI98 192 aaPredicted RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 TBPL2Q6SJ96 375 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 C5orf46Q6UWT4 87 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 MDGA2Q7Z553 956 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 NKAIN4Q8IVV8 208 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 ZADH2Q8N4Q0 377 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 DHRSXQ8N5I4 330 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 FADS6Q8N9I5 356 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 WDSUB1Q8N9V3 476 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 TMEM178AQ8NBL3 297 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 FDCSPQ8NFU4 85 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 OR2M3Q8NG83 312 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 OR4K5Q8NGD3 323 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 PIGXQ8TBF5 258 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 GATA6Q92908 595 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 MRGPRX4Q96LA9 322 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 ZNF597Q96LX8 424 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 ZNF184Q99676 751 aaPredicted RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 SMAD5Q99717 465 aaKnown RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 TACO1Q9BSH4 297 aaKnown RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 FUZQ9BT04 418 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 TMEM43Q9BTV4 400 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 DGCR6LQ9BY27 220 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 ZFP64Q9NPA5 681 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 KRT84Q9NSB2 600 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 SMPD3Q9NY59 655 aaPredicted RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 VNN3Q9NY84 501 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 PLA2G3Q9NZ20 509 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 BOKQ9UMX3 212 aaPredicted RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 POFUT2Q9Y2G5 429 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 PCDHGA9Q9Y5G4 932 aaKnown RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 CPAMD8Q8IZJ3 1885 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 PCSK5Q92824 1860 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 MKRN2OSH3BPM6 223 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 LINC01387J3KSC0 135 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 ADAM10O14672 748 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 EI24O14681 340 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 GNB5O14775 395 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 SNPHO15079 494 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 ADAM11O75078 769 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 SLC25A12O75746 678 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 NEURL1O76050 574 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 ADAP00813 363 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 ACADSP16219 412 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 IGFBP5P24593 272 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 TACR3P29371 465 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 CLK1P49759 484 aaKnown RBP9.39□□□□□ -0.91
MDC1-205ENST00000425072 DAPP51397 102 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 UGT2B15P54855 530 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 PLAURQ03405 335 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 TLE3Q04726 772 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 MERTKQ12866 999 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 SLC25A53Q5H9E4 307 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 BICRALQ6AI39 1079 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 FAHD1Q6P587 224 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 IZUMO2Q6UXV1 221 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 CD300LDQ6UXZ3 194 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 TMPRSS11FQ6ZWK6 438 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 PRICKLE2Q7Z3G6 844 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 ZER1Q7Z7L7 766 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 ZNF227Q86WZ6 799 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 FAM98AQ8NCA5 519 aaKnown RBP9.39□□□□□ -0.91
MDC1-205ENST00000425072 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 ZBTB8AQ96BR9 441 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 C3orf49Q96BT1 292 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 C1GALT1C1Q96EU7 318 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 JSRP1Q96MG2 331 aaPredicted RBP9.39□□□□□ -0.91
MDC1-205ENST00000425072 GNRHR2Q96P88 292 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 PRSS27Q9BQR3 290 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 UCK2Q9BZX2 261 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 SMURF2Q9HAU4 748 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 PROK2Q9HC23 129 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 PAPOLBQ9NRJ5 636 aaKnown RBP9.39□□□□□ -0.91
MDC1-205ENST00000425072 MAN2C1Q9NTJ4 1040 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 B4GALT7Q9UBV7 327 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 RAB26Q9ULW5 256 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 NTNG1Q9Y2I2 539 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 MAGED1Q9Y5V3 778 aaPredicted RBP9.39□□□□□ -0.91
MDC1-205ENST00000425072 SPIN1Q9Y657 262 aaPredicted RBP9.39□□□□□ -0.91
MDC1-205ENST00000425072 ACACAQ13085 2346 aa9.39□□□□□ -0.91
MDC1-205ENST00000425072 WDFY3Q8IZQ1 3526 aa9.38□□□□□ -0.91
MDC1-205ENST00000425072 TMED7-TICAM2A0A0A6YYA0 188 aa9.38□□□□□ -0.91
MDC1-205ENST00000425072 TRAV17A0A0B4J275 112 aa9.38□□□□□ -0.91
MDC1-205ENST00000425072 TMEM8BA6NDV4 472 aa9.38□□□□□ -0.91
MDC1-205ENST00000425072 CYSRT1A8MQ03 144 aa9.38□□□□□ -0.91
MDC1-205ENST00000425072 A8MVM7 634 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms