RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 THEM6Q8WUY1 208 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 SMPDL3BQ92485 455 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 DVL3Q92997 716 aaPredicted RBP10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 ELP4Q96EB1 424 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 SEC22AQ96IW7 307 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 TLNRD1Q9H1K6 362 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 ANKRD19PQ9H560 264 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 TRBV5-4A0A0C4DH59 114 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 A0A1W2PRQ8 180 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 H0YIV9 168 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 GFYI3L273 518 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 TSPAN6O43657 245 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 PRAMEF2O60811 474 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 ICOSLGO75144 302 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 EPXP11678 715 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 APEHP13798 732 aaKnown RBP10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 PSMB10P40306 273 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 PLA2G7Q13093 441 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 LASP1Q14847 261 aaKnown RBP10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 CXXC5Q7LFL8 322 aaKnown RBP10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 LRRTM1Q86UE6 522 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 AMER3Q8N944 861 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 EDARADDQ8WWZ3 215 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 MRPL48Q96GC5 212 aaKnown RBP10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 IFT27Q9BW83 186 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 PINK1Q9BXM7 581 aa10.47□□□□□ -0.73
SEC61A1-202ENST00000424880 OR2M5A3KFT3 312 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ACOD1A6NK06 481 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 KDM4EB2RXH2 506 aaPredicted RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 COCHO43405 550 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 FARS2O95363 451 aaKnown RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ATP1B2P14415 290 aaPredicted RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 UQCRC2P22695 453 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 PRMT2P55345 433 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 C21orf58P58505 322 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 TBPL1P62380 186 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 SLC25A30Q5SVS4 291 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 FAM71E1Q6IPT2 247 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 CDC73Q6P1J9 531 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 MUC20Q8N307 709 aaPredicted RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 RGMAQ96B86 450 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 C16orf58Q96GQ5 468 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 TMEM169Q96HH4 297 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 F2RL3Q96RI0 385 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF559Q9BR84 538 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 RSRP1Q9BUV0 290 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF471Q9BX82 626 aaPredicted RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 SYNPO2LQ9H987 977 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 SDHAF3Q9NRP4 125 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ASB6Q9NWX5 421 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 SPHK1Q9NYA1 384 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ZMIZ1Q9ULJ6 1067 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 RPH3AQ9Y2J0 694 aaPredicted RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 IDSB3KWA1 339 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 CCSO14618 274 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 SLC25A12O75746 678 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 RAP2BP61225 183 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 BLOC1S1P78537 153 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 KCNAB1Q14722 419 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 CSRP2Q16527 193 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 CDKN3Q16667 212 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 SYTL3Q4VX76 610 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 PRSS55Q6UWB4 352 aaPredicted RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 CAMKMTQ7Z624 323 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 TBC1D19Q8N5T2 526 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF614Q8N883 585 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 DNAAF1Q8NEP3 725 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 SMIM4Q8WVI0 70 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 RFKQ969G6 155 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 OTUB2Q96DC9 234 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ZNF607Q96SK3 696 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 TRMT61BQ9BVS5 477 aaKnown RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 ZDHHC4Q9NPG8 344 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 MRPS18AQ9NVS2 196 aaKnown RBP10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 PCDHB10Q9UN67 800 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 NLRC5Q86WI3 1866 aa10.46□□□□□ -0.73
SEC61A1-202ENST00000424880 FEZF1A0PJY2 475 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 ERAL1O75616 437 aaKnown RBP10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 GIPP09681 153 aaPredicted RBP10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 IFNGR1P15260 489 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 PTAFRP25105 342 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 ART1P52961 327 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 PDZK1IP1Q13113 114 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 TDGQ13569 410 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 OR7A5Q15622 319 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 ADGRF1Q5T601 910 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 C1orf216Q8TAB5 229 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 LINC01599Q8WXQ3 324 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 SLC25A38Q96DW6 304 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 PTDSS2Q9BVG9 487 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 OR51M1Q9H341 326 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 UCK1Q9HA47 277 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 TRIM36Q9NQ86 728 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 FBXL3Q9UKT7 428 aa10.46□□□□□ -0.74
SEC61A1-202ENST00000424880 SCN2AQ99250 2005 aa10.45□□□□□ -0.74
SEC61A1-202ENST00000424880 KIAA1671Q9BY89 1806 aa10.45□□□□□ -0.74
SEC61A1-202ENST00000424880 LOC100509620A0A075B734 347 aa10.45□□□□□ -0.74
SEC61A1-202ENST00000424880 CDHR4A6H8M9 788 aa10.45□□□□□ -0.74
SEC61A1-202ENST00000424880 STC2O76061 302 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms