RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PRMT9Q6P2P2 845 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 LEG1Q6P5S2 330 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ENPP6Q6UWR7 440 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 RTL4Q6ZR62 310 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MOB2Q70IA6 237 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 Q75L30 129 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CACUL1Q86Y37 369 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SLC35F2Q8IXU6 374 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ZBED8Q8IZ13 594 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 SPAG16Q8N0X2 631 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ELMOD1Q8N336 334 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TTC29Q8NA56 475 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 B3GNT7Q8NFL0 401 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 OR13J1Q8NGT2 312 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TMEM163Q8TC26 289 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 FAM110BQ8TC76 370 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MAGEE2Q8TD90 523 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TCP10LQ8TDR4 215 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CA5BP1Q8WTZ4 195 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 RNF133Q8WVZ7 376 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 IRGQQ8WZA9 623 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PSMG2Q969U7 264 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PNPLA2Q96AD5 504 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 RAD51AP1Q96B01 352 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TIMD4Q96H15 378 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TAAR1Q96RJ0 339 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MCCC1Q96RQ3 725 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 RANBP9Q96S59 729 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 FMO2Q99518 471 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CCDC28BQ9BUN5 200 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MCRIP2Q9BUT9 160 aaKnown RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 RACGAP1Q9H0H5 632 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 NXF5Q9H1B4 397 aaKnown RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ARRDC1-AS1Q9H2J1 176 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 CPVLQ9H3G5 476 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 KIR3DX1Q9H7L2 352 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 TLE6Q9H808 572 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 GDF3Q9NR23 364 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 STARD5Q9NSY2 213 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ZFP57Q9NU63 452 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 NECAP2Q9NVZ3 263 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 C2orf42Q9NWW7 574 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 MRPL39Q9NYK5 338 aaKnown RBP3.28□□□□□ -1.88
SF3B1-205ENST00000424674 GPR83Q9NYM4 423 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 FLRT3Q9NZU0 649 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 ANAPC7Q9UJX3 599 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PADI3Q9ULW8 664 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 LAMP3Q9UQV4 416 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PAM16Q9Y3D7 125 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 USP16Q9Y5T5 823 aa3.28□□□□□ -1.88
SF3B1-205ENST00000424674 PTPRCP08575 1304 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 LOC105371267A0A1B0GV96 52 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 A0A1W2PPV9 198 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 A0A1W2PRF3 423 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 A0A1W2PRM7 423 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ARGFXA6NJG6 315 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 F8VP50 259 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SMLR1H3BR10 107 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PRMT5O14744 637 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MSH4O15457 936 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PSTPIP1O43586 416 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SNAI2O43623 268 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 GATCO43716 136 aaKnown RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SYNGR3O43761 229 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SRPX2O60687 465 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SLC19A2O60779 497 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ENTPD5O75356 428 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 CIAO1O76071 339 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 LDOC1O95751 146 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PLAUP00749 431 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 IFNA14P01570 189 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 WNT1P04628 370 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 IFNW1P05000 195 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 ATP1A1P05023 1023 aaKnown RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 IGKV2-30P06310 120 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 OR4E1P0C645 316 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 OCM2P0CE71 109 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PRSS56P0CW18 603 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 NR2C1P13056 603 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PRF1P14222 555 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PRPS1L1P21108 318 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 BCKDHBP21953 392 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 HTR2CP28335 458 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TEAD1P28347 426 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 HOXA7P31268 230 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TNFSF8P32971 234 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MAS1LP35410 378 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 SLC1A1P43005 524 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 RPL14P50914 215 aaKnown RBP3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PLK1P53350 603 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 NTHL1P78549 312 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PAX2Q02962 417 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MADCAM1Q13477 382 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 CHI3L2Q15782 390 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 TNXAQ16473 311 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 IMPG1Q17R60 797 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 C5orf64Q2M2E5 130 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 PIGGQ5H8A4 983 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 MANEAQ5SRI9 462 aa3.27□□□□□ -1.89
SF3B1-205ENST00000424674 CEP85LQ5SZL2 805 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms