RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 RRASP10301 218 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 POU3F2P20265 443 aaPredicted RBP13.27□□□□□ -0.29
MSH5-206ENST00000423982 MAKP20794 623 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 CERS1P27544 350 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
MSH5-206ENST00000423982 TAGLNQ01995 201 aaKnown RBP13.27□□□□□ -0.29
MSH5-206ENST00000423982 GALEQ14376 348 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 MLC1Q15049 377 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 ACSM3Q53FZ2 586 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 CCNJQ5T5M9 372 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 ZNF776Q68DI1 518 aaPredicted RBP13.27□□□□□ -0.29
MSH5-206ENST00000423982 MBOAT2Q6ZWT7 520 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 MEPCEQ7L2J0 689 aaKnown RBP13.27□□□□□ -0.29
MSH5-206ENST00000423982 SLC16A11Q8NCK7 471 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 NUP43Q8NFH3 380 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 CXorf40AQ8TE69 158 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 HGDQ93099 445 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 CAMK1GQ96NX5 476 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 NECAB3Q96P71 396 aaPredicted RBP13.27□□□□□ -0.29
MSH5-206ENST00000423982 BRD7Q9NPI1 651 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 WASH6PQ9NQA3 447 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 RDH8Q9NYR8 311 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 IFNA7P01567 189 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 PTHLHP12272 177 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 PYCR1P32322 319 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 ENPP2Q13822 863 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 DECR1Q16698 335 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 FAAP20Q6NZ36 180 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 CDC73Q6P1J9 531 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 NRSN1Q8IZ57 195 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 ARL14Q8N4G2 192 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 ADAMTS14Q8WXS8 1223 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 GHSRQ92847 366 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 PMEPA1Q969W9 287 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 SIPA1Q96FS4 1042 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 PEX11GQ96HA9 241 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 AHCYL2Q96HN2 611 aaKnown RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 PGLYRP3Q96LB9 341 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 LINC00052Q96N35 136 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 B3GNT4Q9C0J1 378 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 MS4A7Q9GZW8 240 aaPredicted RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 PELI2Q9HAT8 420 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 CDHR4A6H8M9 788 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 TRABD2BA6NFA1 517 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 POM121CA8CG34 1229 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 SCAMP1O15126 338 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 PAK4O96013 591 aaPredicted RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 PCCBP05166 539 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 TEAD1P28347 426 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 BCL6P41182 706 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 SNTB2Q13425 540 aaKnown RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 TCEA2Q15560 299 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 BMP8AQ7Z5Y6 402 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 AMZ2Q86W34 360 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 SHISA5Q8N114 240 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 COL26A1Q96A83 441 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 SLC35A4Q96G79 324 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 MRGPRX1Q96LB2 322 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 C12orf10Q9HB07 376 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 WSB2Q9NYS7 404 aaPredicted RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 ENTPD4Q9Y227 616 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 AK6Q9Y3D8 172 aaKnown RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 SPTBP11277 2137 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 A0A1W2PPL8 197 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 GATBO75879 557 aaKnown RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 RAB3BP20337 219 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 F8A1P23610 371 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 VEGFCP49767 419 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 FAM111BQ6SJ93 734 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 IQCF2Q8IXL9 164 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 ACOT4Q8N9L9 421 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 ZBTB44Q8NCP5 570 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 OR2T4Q8NH00 348 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 OR5K2Q8NHB8 316 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 FANK1Q8TC84 345 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 GABRG3Q99928 467 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 FAIM2Q9BWQ8 316 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 TEX12Q9BXU0 123 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 ZNF436Q9C0F3 470 aaPredicted RBP13.26□□□□□ -0.29
MSH5-206ENST00000423982 TMEM168Q9H0V1 697 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 C20orf85Q9H1P6 137 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 LMAN1LQ9HAT1 526 aa13.26□□□□□ -0.29
MSH5-206ENST00000423982 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 NPIPA5A0A0B4J1W7 369 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
MSH5-206ENST00000423982 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 NPIPA7E9PJI5 369 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 M0R233 179 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 NUPL2O15504 423 aaKnown RBP13.25□□□□□ -0.29
MSH5-206ENST00000423982 ALDOBP05062 364 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 NPIPA8P0DM63 369 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 MAGEB1P43366 347 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 BLVRAP53004 296 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 TSPAN5P62079 268 aa13.25□□□□□ -0.29
MSH5-206ENST00000423982 ZNF85Q03923 595 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms