RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 FCAMRQ8WWV6 532 aa9.91□□□□□ -0.82
USP54-204ENST00000422491 GFI1Q99684 422 aa9.91□□□□□ -0.82
USP54-204ENST00000422491 MCHR1Q99705 422 aa9.91□□□□□ -0.82
USP54-204ENST00000422491 SEMA4CQ9C0C4 833 aa9.91□□□□□ -0.82
USP54-204ENST00000422491 PLAGL1Q9UM63 463 aa9.91□□□□□ -0.82
USP54-204ENST00000422491 F8W036 122 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 OGG1O15527 345 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 PRAMEF2O60811 474 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 ADAM11O75078 769 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 PRKRAO75569 313 aaKnown RBP9.9□□□□□ -0.82
USP54-204ENST00000422491 CLUP10909 449 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 ZNF35P13682 527 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 SLC2A5P22732 501 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 NOS3P29474 1203 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 CD96P40200 585 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 ARHGDIBP52566 201 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 SLC36A1Q7Z2H8 476 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 RFLNBQ8N5W9 214 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 OR2A12Q8NGT7 310 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 SFXN5Q8TD22 340 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 SMPDL3BQ92485 455 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 SMIM19Q96E16 107 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 PEX11GQ96HA9 241 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 FERD3LQ96RJ6 166 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 GINS4Q9BRT9 223 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 DPH1Q9BZG8 443 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 OR51V1Q9H2C8 321 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 CMC2Q9NRP2 79 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 SLC39A1Q9NY26 324 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 PLCL2Q9UPR0 1127 aa9.9□□□□□ -0.82
USP54-204ENST00000422491 A0A0A6YYD5 115 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 FEZF1A0PJY2 475 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 UNC119BA6NIH7 251 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 H7C2Y5 167 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 PYCARD-AS1I3L0S3 204 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 PPM1DO15297 605 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 NDUFS4O43181 175 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 CDC123O75794 336 aaPredicted RBP9.9□□□□□ -0.83
USP54-204ENST00000422491 PRG2P13727 222 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 RPA2P15927 270 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 DPP4P27487 766 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 ACADLP28330 430 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 TEAD1P28347 426 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 PRKAR1BP31321 381 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 CAPZA2P47755 286 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 GDI2P50395 445 aaKnown RBP9.9□□□□□ -0.83
USP54-204ENST00000422491 SLC16A1P53985 500 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 DUSP2Q05923 314 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 TGM3Q08188 693 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 SCRN3Q0VDG4 424 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 KRT33BQ14525 404 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 CDK5R1Q15078 307 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 DCAF12L2Q5VW00 463 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 CMTM8Q8IZV2 173 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 CAMKVQ8NCB2 501 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 DNAAF1Q8NEP3 725 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 BPIFCQ8NFQ6 507 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 NSMAFQ92636 917 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 OR14A2Q96R54 314 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 OR7D2Q96RA2 312 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 NRTNQ99748 197 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 EPHX3Q9H6B9 360 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 NRIP3Q9NQ35 241 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 SLC7A7Q9UM01 511 aa9.9□□□□□ -0.83
USP54-204ENST00000422491 A0A0G2JN53 185 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 A0A1B0GTQ1 180 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 WASH3PC4AMC7 463 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 MAN2B1O00754 1011 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 SULT1B1O43704 296 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 PTHLHP12272 177 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 P2RX1P51575 399 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 PPP2CBP62714 309 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 PPP2CAP67775 309 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 AGERQ15109 404 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 SERPINA12Q8IW75 414 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 OR52L1Q8NGH7 329 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 OR10K1Q8NGX5 313 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 ZNF461Q8TAF7 563 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 AIF1LQ9BQI0 150 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 SLC19A3Q9BZV2 496 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 ZDHHC5Q9C0B5 715 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
USP54-204ENST00000422491 FANCFQ9NPI8 374 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 SIDT1Q9NXL6 827 aaKnown RBP9.89□□□□□ -0.83
USP54-204ENST00000422491 RASL12Q9NYN1 266 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 TAS2R10Q9NYW0 307 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 TAC3Q9UHF0 121 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 ZNF223Q9UK11 482 aaPredicted RBP9.89□□□□□ -0.83
USP54-204ENST00000422491 LSM7Q9UK45 103 aaKnown RBP9.89□□□□□ -0.83
USP54-204ENST00000422491 FBXL4Q9UKA2 621 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 ADAM29Q9UKF5 820 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 DENND4AQ7Z401 1863 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 KIAA1549LQ6ZVL6 1849 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 GLOD5A6NK44 160 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 PRSS44E7EML9 344 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 F5H5P2 479 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 EIF4E2O60573 245 aaKnown RBP9.89□□□□□ -0.83
USP54-204ENST00000422491 ABLIM3O94929 683 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 TIMP2P16035 220 aa9.89□□□□□ -0.83
USP54-204ENST00000422491 MAKP20794 623 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms