RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 BCHEP06276 602 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 UQCRBP14927 111 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 HOXB4P17483 251 aaPredicted RBP19.57■□□□□ 0.72
TRAF4-204ENST00000422344 MVDP53602 400 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 CRISP3P54108 245 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 SQLEQ14534 574 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 TMEM201Q5SNT2 666 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 BLOC1S3Q6QNY0 202 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 FCRLAQ7L513 359 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 STK32CQ86UX6 486 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 RNF128Q8TEB7 428 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 SLC25A43Q8WUT9 341 aaPredicted RBP19.57■□□□□ 0.72
TRAF4-204ENST00000422344 CNOT9Q92600 299 aaKnown RBP19.57■□□□□ 0.72
TRAF4-204ENST00000422344 NINJ1Q92982 152 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 SPDL1Q96EA4 605 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 THOC1Q96FV9 657 aaKnown RBP19.57■□□□□ 0.72
TRAF4-204ENST00000422344 LIME1Q9H400 295 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 COQ10BQ9H8M1 238 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 PCDHB14Q9Y5E9 798 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 HRNRQ86YZ3 2850 aaPredicted RBP19.56■□□□□ 0.72
TRAF4-204ENST00000422344 A0A096LPI6 279 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 A0A1W2PNR3 127 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 C16orf97H3BN30 126 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 PRKD3O94806 890 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 TFPIP10646 304 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 KLK2P20151 261 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 APOBEC1P41238 236 aaKnown RBP19.56■□□□□ 0.72
TRAF4-204ENST00000422344 ATP4BP51164 291 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 RAC3P60763 192 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 GRINAQ7Z429 371 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 ABHD3Q8WU67 409 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 MED18Q9BUE0 208 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 PAIP1Q9H074 479 aaKnown RBP19.56■□□□□ 0.72
TRAF4-204ENST00000422344 RABEP2Q9H5N1 569 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 PLSCR4Q9NRQ2 329 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 TMEM45AQ9NWC5 275 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 EDARQ9UNE0 448 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 TESMINQ9Y4I5 508 aa19.56■□□□□ 0.72
TRAF4-204ENST00000422344 FLNAP21333 2647 aaKnown RBP19.55■□□□□ 0.72
TRAF4-204ENST00000422344 CLIC1O00299 241 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 NID1P14543 1247 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 NCF2P19878 526 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-204ENST00000422344 RPS4Y1P22090 263 aaKnown RBP19.55■□□□□ 0.72
TRAF4-204ENST00000422344 AGTR1P30556 359 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 UGT2B10P36537 528 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 IDH2P48735 452 aaKnown RBP19.55■□□□□ 0.72
TRAF4-204ENST00000422344 LIN52Q52LA3 116 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 AGKQ53H12 422 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 MRPL2Q5T653 305 aaKnown RBP19.55■□□□□ 0.72
TRAF4-204ENST00000422344 CDC20BQ86Y33 519 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 FUNDC1Q8IVP5 155 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 SLC43A2Q8N370 569 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 OR52P1PQ8NH57 321 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 SLC38A5Q8WUX1 472 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 SIKE1Q9BRV8 207 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 KLHL4Q9C0H6 718 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 C12orf49Q9H741 205 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 NPHS2Q9NP85 383 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 CTPS2Q9NRF8 586 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 KLHL28Q9NXS3 571 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 KLHL13Q9P2N7 655 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 CHRNA9Q9UGM1 479 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 ST6GALNAC2Q9UJ37 374 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 DCTN4Q9UJW0 460 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 TRIM33Q9UPN9 1127 aa19.55■□□□□ 0.72
TRAF4-204ENST00000422344 EDF1O60869 148 aaKnown RBP19.54■□□□□ 0.72
TRAF4-204ENST00000422344 TFPTP0C1Z6 253 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 ENPP1P22413 925 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 HTR3AP46098 478 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 CSNK2A1P68400 391 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-204ENST00000422344 FADDQ13158 208 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 RGNQ15493 299 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 SYT14P1Q58G82 188 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 ZNF440Q8IYI8 595 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 STON2Q8WXE9 905 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 TMEM19Q96HH6 336 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 TACO1Q9BSH4 297 aaKnown RBP19.54■□□□□ 0.72
TRAF4-204ENST00000422344 CCDC106Q9BWC9 280 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 GP6Q9HCN6 339 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 ZNF226Q9NYT6 803 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 KLHL9Q9P2J3 617 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 ZNF232Q9UNY5 417 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 HEATR5AQ86XA9 2040 aa19.54■□□□□ 0.72
TRAF4-204ENST00000422344 IGHV3-15A0A0B4J1V0 119 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 A0A0G2JPF8 293 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 CFAP73A6NFT4 308 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 HNRNPCL2B2RXH8 293 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 HNRNPCL3B7ZW38 293 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 C5orf58C9J3I9 102 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 SULT2B1O00204 365 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 AP3D1O14617 1153 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 HNRNPCL1O60812 293 aaKnown RBP19.53■□□□□ 0.72
TRAF4-204ENST00000422344 HNRNPCL4P0DMR1 293 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 PPIBP23284 216 aaKnown RBP19.53■□□□□ 0.72
TRAF4-204ENST00000422344 FKBP2P26885 142 aaKnown RBP19.53■□□□□ 0.72
TRAF4-204ENST00000422344 LARS2Q15031 903 aaKnown RBP19.53■□□□□ 0.72
TRAF4-204ENST00000422344 POU4F3Q15319 338 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 MAPK11Q15759 364 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 RPS26P11Q5JNZ5 115 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-204ENST00000422344 BEND4Q6ZU67 534 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms