RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CRISP3P54108 245 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 DSTNP60981 165 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 TESK1Q15569 626 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 GTDC1Q4AE62 458 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 SYT14P1Q58G82 188 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 GRINAQ7Z429 371 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 CNOT9Q92600 299 aaKnown RBP13.67□□□□□ -0.22
NUP50-204ENST00000417702 EBF4Q9BQW3 602 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
NUP50-204ENST00000417702 LIME1Q9H400 295 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 RAD21L1Q9H4I0 556 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 C12orf49Q9H741 205 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 KLHL9Q9P2J3 617 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 KLHL13Q9P2N7 655 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 PLEKHA6Q9Y2H5 1048 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 OTOGQ6ZRI0 2925 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 CSMD2Q7Z408 3487 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 TEP1Q99973 2627 aaKnown RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 YES1P07947 543 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 NID1P14543 1247 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 PPP3CBP16298 524 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 RPS4Y1P22090 263 aaKnown RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 ENPP1P22413 925 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 FKBP2P26885 142 aaKnown RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 CCKARP32238 428 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 HTR3AP46098 478 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 IDH2P48735 452 aaKnown RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 MVDP53602 400 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 CSNK2A1P68400 391 aaPredicted RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 IRX1P78414 480 aaPredicted RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 SLC2A7Q6PXP3 512 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 SPNS3Q6ZMD2 512 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 TMPPEQ6ZT21 453 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 TUSC5Q8IXB3 177 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 ZNF440Q8IYI8 595 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 GTF2H4Q92759 462 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 AURKBQ96GD4 344 aaPredicted RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 CCDC106Q9BWC9 280 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 CTPS2Q9NRF8 586 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 CCM2LQ9NUG4 571 aaPredicted RBP13.66□□□□□ -0.22
NUP50-204ENST00000417702 CHRNA9Q9UGM1 479 aa13.66□□□□□ -0.22
NUP50-204ENST00000417702 IGHV3-15A0A0B4J1V0 119 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 SULT2B1O00204 365 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 NR5A2O00482 541 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 EDF1O60869 148 aaKnown RBP13.65□□□□□ -0.22
NUP50-204ENST00000417702 BCHEP06276 602 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 CRYGSP22914 178 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 DIO1P49895 249 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 KEAP1Q14145 624 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 LIN52Q52LA3 116 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.22
NUP50-204ENST00000417702 ANKRD34AQ69YU3 496 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 OR52P1PQ8NH57 321 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 SPDL1Q96EA4 605 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 ZHX1-C8orf76Q96EF9 292 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 ZC3HAV1LQ96H79 300 aaKnown RBP13.65□□□□□ -0.22
NUP50-204ENST00000417702 PAIP1Q9H074 479 aaKnown RBP13.65□□□□□ -0.22
NUP50-204ENST00000417702 PLEKHF2Q9H8W4 249 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 TMEM45AQ9NWC5 275 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 CCDC167Q9P0B6 97 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 C6orf203Q9P0P8 240 aaPredicted RBP13.65□□□□□ -0.22
NUP50-204ENST00000417702 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 PCDHB14Q9Y5E9 798 aa13.65□□□□□ -0.22
NUP50-204ENST00000417702 PRRC2AP48634 2157 aaKnown RBP13.65□□□□□ -0.22
NUP50-204ENST00000417702 A0A096LPI6 279 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 CLIC1O00299 241 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 RAF1P04049 648 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
NUP50-204ENST00000417702 ATP4BP51164 291 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 POLR2HP52434 150 aaKnown RBP13.64□□□□□ -0.23
NUP50-204ENST00000417702 PLAURQ03405 335 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 RASGEF1BQ0VAM2 473 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 FADDQ13158 208 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 SQLEQ14534 574 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 LARS2Q15031 903 aaKnown RBP13.64□□□□□ -0.23
NUP50-204ENST00000417702 RGNQ15493 299 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 MAPK11Q15759 364 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 ZSWIM7Q19AV6 140 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 STAC2Q6ZMT1 411 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 NUFIP2Q7Z417 695 aaKnown RBP13.64□□□□□ -0.23
NUP50-204ENST00000417702 PIK3IP1Q96FE7 263 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 TMEM19Q96HH6 336 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 FOXC2Q99958 501 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 SIKE1Q9BRV8 207 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 RABEP2Q9H5N1 569 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 ARMC7Q9H6L4 198 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 GPR52Q9Y2T5 361 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 HDGFL3Q9Y3E1 203 aa13.64□□□□□ -0.23
NUP50-204ENST00000417702 ROS1P08922 2347 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 TMED7-TICAM2A0A0A6YYA0 188 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 A0A0G2JPF8 293 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 HNRNPCL2B2RXH8 293 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 HNRNPCL3B7ZW38 293 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms