RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 S100PBPQ96BU1 408 aa22.52■■□□□ 1.2
VEGFA-208ENST00000417285 PLPPR2Q96GM1 343 aa22.52■■□□□ 1.2
VEGFA-208ENST00000417285 NSD1Q96L73 2696 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-208ENST00000417285 A0A1W2PNR3 127 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 IL32P24001 234 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 PGM1P36871 562 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 APOBEC1P41238 236 aaKnown RBP22.51■■□□□ 1.19
VEGFA-208ENST00000417285 CSNK2A1P68400 391 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-208ENST00000417285 RASGEF1BQ0VAM2 473 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 FUT5Q11128 374 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 MERTKQ12866 999 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 MAPK14Q16539 360 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 PDCD4Q53EL6 469 aaKnown RBP22.51■■□□□ 1.19
VEGFA-208ENST00000417285 FRRS1Q6ZNA5 592 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 ZNF621Q6ZSS3 439 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 RNF130Q86XS8 419 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 PIWIL2Q8TC59 973 aaKnown RBP22.51■■□□□ 1.19
VEGFA-208ENST00000417285 SLC25A43Q8WUT9 341 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-208ENST00000417285 MAELQ96JY0 434 aaKnown RBP22.51■■□□□ 1.19
VEGFA-208ENST00000417285 OR5B2Q96R09 309 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 TMEM204Q9BSN7 226 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 BDH2Q9BUT1 245 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 GSX2Q9BZM3 304 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 LIPT1Q9Y234 373 aa22.51■■□□□ 1.19
VEGFA-208ENST00000417285 SPIN1Q9Y657 262 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-208ENST00000417285 ZNF724A8MTY0 619 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 HMGN4O00479 90 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 KLF11O14901 512 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 CYTIPO60759 359 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 IL6P05231 212 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 HOXB4P17483 251 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-208ENST00000417285 ITGADQ13349 1161 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 TMPPEQ6ZT21 453 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 ZNF611Q8N823 705 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 FAM71CQ8NEG0 241 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 KISS1RQ969F8 398 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-208ENST00000417285 PSD2Q9BQI7 771 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 INPP5KQ9BT40 448 aa22.5■■□□□ 1.19
VEGFA-208ENST00000417285 QRSL1Q9H0R6 528 aaKnown RBP22.5■■□□□ 1.19
VEGFA-208ENST00000417285 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-208ENST00000417285 SLC22A3O75751 556 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 H6PDO95479 791 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 ADAP00813 363 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 PAX1P15863 534 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 OR3A2P47893 321 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 GSTA3Q16772 222 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 SLC9B1Q4ZJI4 515 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 AGBL2Q5U5Z8 902 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 Q6ZT83 130 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 TMEM171Q8WVE6 324 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 IGFBPL1Q8WX77 278 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 PMM1Q92871 262 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 TRNT1Q96Q11 434 aaKnown RBP22.49■■□□□ 1.19
VEGFA-208ENST00000417285 CXorf56Q9H5V9 222 aa22.49■■□□□ 1.19
VEGFA-208ENST00000417285 IGHV3-15A0A0B4J1V0 119 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 SULT2B1O00204 365 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 RFXANKO14593 260 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 HS3ST1O14792 307 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 SMAD9O15198 467 aaKnown RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 KRT75O95678 551 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 CDKN2CP42773 168 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 CLK1P49759 484 aaKnown RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 DIO1P49895 249 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 KCNJ10P78508 379 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 CHRNEQ04844 493 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 SYT14P1Q58G82 188 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 ADAM5Q6NVV9 412 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 SSX8Q7RTT4 187 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 YTHDF3Q7Z739 585 aaKnown RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 GALNT5Q7Z7M9 940 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 MTDHQ86UE4 582 aaKnown RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 ZNF563Q8TA94 476 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 ZNF75CPQ92670 426 aaPredicted RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 PERPQ96FX8 193 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 ESRP2Q9H6T0 727 aaKnown RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 EXOSC3Q9NQT5 275 aaKnown RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 ZIM2Q9NZV7 527 aa22.48■■□□□ 1.19
VEGFA-208ENST00000417285 ING1Q9UK53 422 aaPredicted RBP22.48■■□□□ 1.19
VEGFA-208ENST00000417285 DSCAMO60469 2012 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 PRAMEF27A3QJZ7 478 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 ZNF814B7Z6K7 855 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 CNOT4O95628 575 aaKnown RBP22.47■■□□□ 1.19
VEGFA-208ENST00000417285 GSNP06396 782 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 PDK3Q15120 406 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 CLEC9AQ6UXN8 241 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 CMIPQ8IY22 773 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 ARFGAP2Q8N6H7 521 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 ZG16BQ96DA0 208 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 ZHX1-C8orf76Q96EF9 292 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 Q96MF0 132 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 CCDC106Q9BWC9 280 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 MTHFD2LQ9H903 347 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-208ENST00000417285 EMC3Q9P0I2 261 aa22.47■■□□□ 1.19
VEGFA-208ENST00000417285 UBDO15205 165 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 PLAUP00749 431 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 C1QCP02747 245 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 TFPIP10646 304 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 MAGEA8P43361 318 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 HTR3AP46098 478 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 PTH2RP49190 550 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms