RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MYO7BQ6PIF6 2116 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 PCNX3Q9H6A9 2034 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 ELOVL7A1L3X0 281 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 H0YC42 278 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 C8BP07358 591 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 RNF224P0DH78 156 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 IL11P20809 199 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 SLC7A1P30825 629 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 CEACAM8P31997 349 aaPredicted RBP20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 SFTPDP35247 375 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 EIF1AXP47813 144 aaKnown RBP20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 CPA2P48052 419 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 POLR2HP52434 150 aaKnown RBP20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 TPD52P55327 224 aaPredicted RBP20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 CARD18P57730 90 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 LIPEQ05469 1076 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 DMTNQ08495 405 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 HBMQ6B0K9 141 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 POMZP3Q6PJE2 187 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 SEM1Q6ZVN7 128 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 MICU2Q8IYU8 434 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 OR10D3Q8NH80 312 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 ZFP3Q96NJ6 502 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 CTPS2Q9NRF8 586 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 CLCF1Q9UBD9 225 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 ZNF175Q9Y473 711 aa20.77■□□□□ 0.92
SMARCB1-205ENST00000417137 A0A0G2JNJ9 132 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 A0A0J9YW62 118 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 SLC22A20A6NK97 555 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 TNFSF11O14788 317 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 TPST1O60507 370 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 GCM2O75603 506 aaPredicted RBP20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 SYNGR4O95473 234 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 CLDN14O95500 239 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 CADM2Q8N3J6 435 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 SMYD1Q8NB12 490 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 TNIP2Q8NFZ5 429 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 OSTF1Q92882 214 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 ADGRG7Q96K78 797 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 PSMG3-AS1Q96PY0 264 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 PRRG4Q9BZD6 226 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 ADAM19Q9H013 955 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 SPAG4Q9NPE6 437 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 Q9UFV3 132 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 CHRNA9Q9UGM1 479 aa20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 MCTS1Q9ULC4 181 aaKnown RBP20.76■□□□□ 0.91
SMARCB1-205ENST00000417137 SYT5O00445 386 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 TOXO94900 526 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 RCBTB2O95199 551 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 FCGR2AP12318 317 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 TACR3P29371 465 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 KCNJ5P48544 419 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 CLK1P49759 484 aaKnown RBP20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 MXRA7P84157 204 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 CTU2Q2VPK5 515 aaKnown RBP20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 EEF1A1P5Q5VTE0 462 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 OR2A2Q6IF42 318 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 ADGRG3Q86Y34 549 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 CCDC71Q8IV32 467 aaPredicted RBP20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 LILRB4Q8NHJ6 448 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 NSL1Q96IY1 281 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 ALG2Q9H553 416 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 RPS6KB2Q9UBS0 482 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 OSGIN1Q9UJX0 560 aa20.75■□□□□ 0.91
SMARCB1-205ENST00000417137 TMED7-TICAM2A0A0A6YYA0 188 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 KDM4EB2RXH2 506 aaPredicted RBP20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 NME4O00746 187 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 GSTA4O15217 222 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 CXCL13O43927 109 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 LGI1O95970 557 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 OPN1SWP03999 348 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 TFPIP10646 304 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 PRG2P13727 222 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 CXCR1P25024 350 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 RGS8P57771 180 aaPredicted RBP20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 NCALDP61601 193 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 PON3Q15166 354 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 DUSP7Q16829 419 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 C16orf89Q6UX73 402 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 C9orf106Q8NAJ2 232 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 ZNF845Q96IR2 970 aaPredicted RBP20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 ZNF559Q9BR84 538 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 TRIM2Q9C040 744 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 ADA2Q9NZK5 511 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 ABCD2Q9UBJ2 740 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 ZNF629Q9UEG4 869 aaPredicted RBP20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 TMED7Q9Y3B3 224 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 LRRK2Q5S007 2527 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 DOPEY2Q9Y3R5 2298 aa20.74■□□□□ 0.91
SMARCB1-205ENST00000417137 MED12Q93074 2177 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 DVL2O14641 736 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 ZNF208O43345 1280 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 FRS3O43559 492 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 TMIGD3P0DMS9 266 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 CTSSP25774 331 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 KDELR2P33947 212 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 GLIPR1L2Q4G1C9 344 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 SYT14P1Q58G82 188 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 GTF2IRD2BQ6EKJ0 949 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 PPP4R4Q6NUP7 873 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms