RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 OR8J3Q8NGG0 315 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 RP9Q8TA86 221 aaKnown RBP16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 FNDC9Q8TBE3 224 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 SLC25A43Q8WUT9 341 aaPredicted RBP16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 SLC35B4Q969S0 331 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 MARVELD3Q96A59 401 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 ZNF607Q96SK3 696 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 CCDC106Q9BWC9 280 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 PRRG4Q9BZD6 226 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 TRIM8Q9BZR9 551 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 RNF122Q9H9V4 155 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 GID8Q9NWU2 228 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 PRORSD1PA6NEY8 169 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 C19orf84I3L1E1 186 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 AP3D1O14617 1153 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 CXCL13O43927 109 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 ADAM11O75078 769 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 COX6B1P14854 86 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 FKBP2P26885 142 aaKnown RBP16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 SHC1P29353 583 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 PRKAR1BP31321 381 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 ASCL1P50553 236 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 CARD18P57730 90 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 SELPLGQ14242 412 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 TMEM176BQ3YBM2 270 aaPredicted RBP16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 NANOGP8Q6NSW7 305 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 PPP4R4Q6NUP7 873 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 POMZP3Q6PJE2 187 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 NET1Q7Z628 596 aaPredicted RBP16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 SERPINA11Q86U17 422 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 MTDHQ86UE4 582 aaKnown RBP16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 ATP6V1C2Q8NEY4 427 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 OSTF1Q92882 214 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 CPNE4Q96A23 557 aaPredicted RBP16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 SLC39A3Q9BRY0 314 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 NANOGQ9H9S0 305 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 CHRNA9Q9UGM1 479 aa16.16■□□□□ 0.18
SEMA3B-201ENST00000416295 A0A1W2PNV4 684 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 FXYD1O00168 92 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 SERPINB7O75635 380 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 SLC1A3P43003 542 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 COPZ1P61923 177 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 FOXF2Q12947 444 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 FBXL19-AS1Q494R0 122 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 PTOV1Q86YD1 416 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 CLIP4Q8N3C7 705 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 BHLHE22Q8NFJ8 381 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 REXO5Q96IC2 774 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 SPOCK3Q9BQ16 436 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 ENKD1Q9H0I2 346 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 PIGMQ9H3S5 423 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 NPDC1Q9NQX5 325 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 CTPS2Q9NRF8 586 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 FOXD3Q9UJU5 478 aaPredicted RBP16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 PACSIN3Q9UKS6 424 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 KIAA1549Q9HCM3 1950 aa16.15■□□□□ 0.18
SEMA3B-201ENST00000416295 ENO4A6NNW6 628 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 EEF1E1-BLOC1S5C9J1V9 151 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 EEF1E1O43324 174 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 AQP8O94778 261 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 GKN3PP0CG01 181 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 COX4I1P13073 169 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 AQP1P29972 269 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 PCGF2P35227 344 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 POLR2HP52434 150 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 MAP2K6P52564 334 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 AGFG1P52594 562 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 SYT14P1Q58G82 188 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 INTS11Q5TA45 600 aaKnown RBP16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 DHRS4L2Q6PKH6 230 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 POU5F2Q8N7G0 328 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 ACBD4Q8NC06 268 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 OR10A6Q8NH74 314 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 RCN3Q96D15 328 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 OR5B2Q96R09 309 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 ECSITQ9BQ95 431 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 COQ10BQ9H8M1 238 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 CHST2Q9Y4C5 530 aa16.14■□□□□ 0.17
SEMA3B-201ENST00000416295 CACNA1CQ13936 2221 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 TNFSF13O75888 250 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 PLGP00747 810 aaPredicted RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 TACR3P29371 465 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 PEX19P40855 299 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 ACAA2P42765 397 aaKnown RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 CLK1P49759 484 aaKnown RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 PCBP3P57721 371 aaKnown RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 RAC3P60763 192 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 ZNF239Q16600 458 aaKnown RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 RABL3Q5HYI8 236 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 GTF2IRD2BQ6EKJ0 949 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 WBP2NLQ6ICG8 309 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 MEX3BQ6ZN04 569 aaKnown RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 ARPINQ7Z6K5 226 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 GTF2IRD2Q86UP8 949 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 ARMC8Q8IUR7 673 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 ZZZ3Q8IYH5 903 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 CNEP1R1Q8N9A8 125 aa16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 RNASE6Q93091 150 aaKnown RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 GMPPAQ96IJ6 420 aaPredicted RBP16.13■□□□□ 0.17
SEMA3B-201ENST00000416295 MYLK2Q9H1R3 596 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms