RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MBL2P11226 248 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 MMP9P14780 707 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 RPA2P15927 270 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 HOXB8P17481 243 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 XRCC1P18887 633 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A6P19224 532 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A4P22310 534 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FASP25445 335 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UCP1P25874 307 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CD40LGP29965 261 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 MIPP30301 263 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A3P35503 534 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A5P35504 534 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC26A3P40879 764 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ETV5P41161 510 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ALDH3B1P43353 468 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SERPINB10P48595 397 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 GSSP48637 474 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 NPY2RP49146 381 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 MMP15P51511 669 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCR4P51679 360 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARHGDIAP52565 204 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 NDST2P52849 883 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSME3P61289 254 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 VBP1P61758 197 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TSPAN5P62079 268 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 MRPS22P82650 360 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDKL1Q00532 357 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 OGDHQ02218 1023 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF33AQ06730 810 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLAQ13239 276 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UBE2V1Q13404 147 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 IL18R1Q13478 541 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CEACAM7Q14002 265 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SELPLGQ14242 412 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 PON2Q15165 354 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 PHKG1Q16816 387 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM83EQ2M2I3 478 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM98BQ52LJ0 330 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 IFI44LQ53G44 452 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF789Q5FWF6 425 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF311Q5JNZ3 666 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TCHHL1Q5QJ38 904 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 PHYHD1Q5SRE7 291 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCNJQ5T5M9 372 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARHGEF16Q5VV41 709 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FKBP1CQ5VVH2 108 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRRC66Q68CR7 880 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 NCR3LG1Q68D85 454 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SPOPLQ6IQ16 392 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 LCN8Q6JVE9 175 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANKRD26P1Q6NSI1 321 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 NANOGP8Q6NSW7 305 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 APOBEC3HQ6NTF7 200 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC39A4Q6P5W5 647 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 PODNL1Q6PEZ8 512 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF773Q6PK81 442 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ASPGQ86U10 573 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 YRDCQ86U90 279 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM135Q86UB9 458 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ITIH5Q86UX2 942 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 DHFR2Q86XF0 187 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CLVS1Q8IUQ0 354 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 C10orf107Q8IVU9 208 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM219AQ8IW50 185 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 DHRSXQ8N5I4 330 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FADS6Q8N9I5 356 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRPV3Q8NET8 790 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR52E4Q8NGH9 312 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR56B1Q8NGI3 324 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR52B4Q8NGK2 314 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR10T2Q8NGX3 314 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCDC124Q96CT7 223 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 AURKBQ96GD4 344 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC41A3Q96GZ6 507 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 QKIQ96PU8 341 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRNT1Q96Q11 434 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC22A12Q96S37 553 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 VAT1Q99536 393 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CITED1Q99966 193 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM213AQ9BRX8 229 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 INPP5KQ9BT40 448 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 GBA3Q9H227 469 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UBQLN3Q9H347 655 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A10Q9HAW8 530 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 NMRAL1Q9HBL8 299 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ACP6Q9NPH0 428 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC52A3Q9NQ40 469 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 FBXO8Q9NRD0 319 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 AGPAT4Q9NRZ5 378 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CISHQ9NSE2 258 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 DUS2Q9NX74 493 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 RBAKQ9NYW8 714 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ABCD2Q9UBJ2 740 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 MARCOQ9UEW3 520 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 ENTPD4Q9Y227 616 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms